Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre03g1107 | ATGGAGCAGCCGTTTTTCAATCAGTCTCCACCGTCGGTCTCTCTCTCGCAATCAGTCTCCACCGTCGTTTCTCTCTTCTCCGACTTTCCATTCTCCGTGGTCGGTGTCTTAGTCGCTCTCTCTCTCACAACCAGTCTTCCCGTTTCCGTCGTCGAAGGTCTTTCGTGGAACTTCTGTTCGCAAGTCATTCAGCGTTGCATGCTGTCCTTGGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAGCCTCTTGAGAAGATTATGTTCAAGTATGTTGAACTGTGTGTGGATATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCCTTAGAAGAAGCTCTGGACGTTGATGATTTAGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAAAAGGGAAAGGATAGATCTGATCGTGAACTTGTTACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGAACAGTTCTTGAGATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGGTGTACAAAAGAACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGGGATCGGCCTGATCTTTCTGCTCCAGAGAGCTTGCAATTATACCTCGACACTAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTTTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATCCATGGTTTGATGTGCATGGTGAAGAAGACACCTAAACCATCCTTGATGGTGGTGTATTACGTCAAATTAACAGAGATCTTCTGGATATCGGACAGCAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCCATTCAGAAAAGTTTCAACAAAAATCTAAGCCAGAAGGATTTGCAGCTGATAGCTTCGTCTGTTCTTTTAGCAACTCTTGCAGTGTCCCCCTATGACTCTAAGCATGGTGCTTCCCATTTAGAACTTGAACATGAGAAAGAGCGAAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGATTCCAAACTTGAAAGTAGAGATGTGCTTTCGAGGGCGAATCTTCTTTCTGAACTGGTGTCTAAAGGAGTCCTGAGCTGCGCAATTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTTTTCCCTCTTGATCTGGCAACAAAATTGCAACCATTACTTAACAAAATATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCCGAAGTGCAGTTGTCTCAATATGTTCCAGCTCTTGAAAAACTTACTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGACAATGAAAATTGAGAGTCTATCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAGATATTAGTTGATGCAGTTAAACAGAATTTCATTGCCATGAAAGTTGATCACTCAAAGAATATTGTGTTATTTGGCAATTTGGGTATCGAATCAGATGGGCTTCGAGACCACCTGACCACTCTTGCAGAATCCTTAAACAAATCAAGAGATATGATCTATCCTCCAGTTAGGAAAGCCTCGAAAACAGGTGATATGTTGCCTGATTTGGCAGATATTGTTGATAAAGAGCACAAGAGGTTGCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGAAGGTTAAAATTACTGAAGATAACTGAAGAAGCTGAGCAGAAGCGGCTTGCTGCAGAATATGAACAAAGGAAAAACCAACGGCTTCGTAGGGAAATAGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAACGTGTTGGTAAAAAGAAGGGAAGCAGGAAACCGGTTCTTGACTCTGAAAAGTTGTCGAAACAAACTTTAATGCAGTTGGCCCTTACTGAACAATTAAGGGAGAGACAAGAAATGGAGAAGAAATTACAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCTGCAACGTTAATTGAAGCTGCATTTCAGCAACGTTTGCTTGAAGAGAGAATGATCCATGAACGTCATCAGCAGCTGGAGGTTGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAGAAGAATCGATTGGCGAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTAATTAGTCTTCGCCAAGAGGAATTCAGCAGACGTAGAGCTGAGAGAGAAGAACATATCAGGCAAATAATTCAGGCCCGGAAAGCGGAAAGGGAGGCTAAGAGGAAGAAAATATTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAGGCTGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAATTGGATGAAAAAGAAAGACTGAGGAAAGAAAGTCTCTTTGGTGGTGGCAGATCATCTGATGCACCTGCTAGACCTGACTTTCCTCCTGCTTCTCGCCCTCTGGAGTCTGGGACTGCTGCTCCTGCCGCTGCTGCTGCTGCTGCAGCTGCCGCACCATCTCCAGCAAAATATGTCCCAAGGTTTCGACGGTCTGAAGGCTCCACCGCTACTGCACCACCACCTGAATCTGATCGATGGGGAAGCAGCCGGCCTGATAATCGGCCATCTCAACCAGATAGCTGGTGCAGTGATGACCGTAGACCTGCATTTGGAAGTTCAAGGTCATCGTGGTCCTCATCCCGAGTTCCTGCTCGTACCAGCACGGACCGCTGA | 3105 | 43.77 | MEQPFFNQSPPSVSLSQSVSTVVSLFSDFPFSVVGVLVALSLTTSLPVSVVEGLSWNFCSQVIQRCMLSLENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLEKIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLFSIQKSFNKNLSQKDLQLIASSVLLATLAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCAIQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLTTLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKILVDAVKQNFIAMKVDHSKNIVLFGNLGIESDGLRDHLTTLAESLNKSRDMIYPPVRKASKTGDMLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLSKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERHQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFSRRRAEREEHIRQIIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAEKQRQRERELDEKERLRKESLFGGGRSSDAPARPDFPPASRPLESGTAAPAAAAAAAAAAPSPAKYVPRFRRSEGSTATAPPPESDRWGSSRPDNRPSQPDSWCSDDRRPAFGSSRSSWSSSRVPARTSTDR | 1034 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10644794 | 10654164 | - | CrPI670011_03g011070.1 | Cre03g1107 | 493137 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre03g1107 | 1034 | Coils | Coil | 624 | 663 | - | - | |
Cre03g1107 | 1034 | Coils | Coil | 862 | 921 | - | - | |
Cre03g1107 | 1034 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 66 | 997 | IPR027512 | GO:0005852(InterPro) | |
Cre03g1107 | 1034 | MobiDBLite | consensus disorder prediction | 877 | 1034 | - | - | |
Cre03g1107 | 1034 | Coils | Coil | 67 | 87 | - | - | |
Cre03g1107 | 1034 | Gene3D | - | 332 | 406 | - | - | |
Cre03g1107 | 1034 | Gene3D | - | 426 | 557 | - | - | |
Cre03g1107 | 1034 | Pfam | eIF3a, PCI domain, TPR-like region | 71 | 470 | IPR054711 | - | |
Cre03g1107 | 1034 | MobiDBLite | consensus disorder prediction | 1013 | 1034 | - | - | |
Cre03g1107 | 1034 | Coils | Coil | 795 | 815 | - | - | |
Cre03g1107 | 1034 | Pfam | PCI domain | 501 | 571 | IPR000717 | - | |
Cre03g1107 | 1034 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 71 | 1025 | IPR027512 | GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER) | |
Cre03g1107 | 1034 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 280 | 331 | - | - | |
Cre03g1107 | 1034 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 415 | 557 | - | - | |
Cre03g1107 | 1034 | Coils | Coil | 156 | 183 | - | - | |
Cre03g1107 | 1034 | Coils | Coil | 666 | 712 | - | - | |
Cre03g1107 | 1034 | Gene3D | UVR domain | 280 | 331 | - | - | |
Cre03g1107 | 1034 | Coils | Coil | 732 | 762 | - | - | |
Cre03g1107 | 1034 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 331 | 405 | - | - | |
Cre03g1107 | 1034 | Coils | Coil | 837 | 857 | - | - | |
Cre03g1107 | 1034 | ProSiteProfiles | PCI domain profile. | 379 | 576 | IPR000717 | - | |
Cre03g1107 | 1034 | MobiDBLite | consensus disorder prediction | 877 | 924 | - | - | |
Cre03g1107 | 1034 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 504 | 595 | IPR000717 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1107 | Cre-Chr3:10644794 | Cre03g2021 | Cre-Chr3:37191140 | 0.00E+00 | dispersed | |
Cre03g1106 | Cre-Chr3:10613532 | Cre03g1107 | Cre-Chr3:10644794 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre03g1107 | K03254 | - | csv:101215735 | 1556.19 |