Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1284 ATGTTTGCTGTCTTCGCAAACCTGGCAGGGGATGGCAACTTCAAACCTTTCATTGGACAAGTTGAGATCTCAAAACCTTTAGATCCATCAAGAGGAACTGCAAAGTGCAGTGGCAGAATATGTGTATACGATGCAAGTCACGGCCCCGGAAACGGTTATAGCTACGGTGTCATCTTGCTTGAGATCCTCACTACCAGACTGCCAGTTGATGAGAAGTTTGGTGAAGGAGTAGACTTGGTGAAATGGGTGCATAGTGCTCCTTTGAGGGGCGAAACACCTGAACAAATACTCGATTCCCAGCTGGGCACGGTTTCGTTTGGCTGGAGGAAGGAGATGCTTGCAGCTCTCAAGATTGCATTGCTCAGCACTGACAGAATACCAGCCAAAAGGCCAAAAATGAAGAAGATGGTGGAAATGCTTCTGGAGATCAAGCAAAATTGA 441 46.94 MFAVFANLAGDGNFKPFIGQVEISKPLDPSRGTAKCSGRICVYDASHGPGNGYSYGVILLEILTTRLPVDEKFGEGVDLVKWVHSAPLRGETPEQILDSQLGTVSFGWRKEMLAALKIALLSTDRIPAKRPKMKKMVEMLLEIKQN 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20408616 20409489 + CrPI670011_03g012840.1 Cre03g1284 493314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1284 146 Gene3D Transferase(Phosphotransferase) domain 1 48 146 - -
Cre03g1284 146 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 50 144 IPR051564 GO:0016020(PANTHER)
Cre03g1284 146 SUPERFAMILY Protein kinase-like (PK-like) 53 143 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1284 Cre-Chr3:20408616 Cre04g0022 Cre-Chr4:383122 8.30E-54 dispersed
Cre03g1284 Cre-Chr3:20408616 Cre07g2020 Cre-Chr7:35813225 4.90E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1284 - - - 0.0