Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1328 ATGGGATCCTGCTTGTCTGCAGGAAGTAAGGAGGCCATTACTGGTTCCTCTGTATCTTCTGTGTTGGGAGCAAGTAAACAGAAAGACTCAGACAATGTGTTTGAGCAGCAGAATCAGGGTGAAGCGACAGTACACAGAATTCCTGGTAGGATGTTCTTGAATGGGTCCAGTGAAGTTGCTTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTTTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCCCTGAAATTGACTGCACATTGGGAAGCTAATGAAGACATTTCAGAAGAGTTAGGTTGTAAAACAGAAGCTGTTAACAATGAAGATTCTACCTTAGAAATTAGTTGGAAGGAAGCTAGTTCTCCCCTTACGCAGCCAGAAATTTCTGAAAAGCTGAAGGAATCATTTCTGAAGGCTTTTCAGATAATGGATGGAGAACTCAAAATTCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGAGACTCTCGGGCTGTGCTGGGTACCAGAGATGAGGATAATTCTCTCCAAGCGGTTCAATTGACCATAGATCTCAAGCCAGATATTCCAGGGGAAGCTGAGAGAATTCTCAAATGCAAAGGTCGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTAGAGTATGGCTTCCAAACAATGATTCCCCCGGGCTGGCGATGGCTCGATCTTTTGGAGACTTTTGCCTCAAGGATTTCGGTCTAATTTCTGTTCCTGAAATATCATATCGTTTTCTGTCTGACAAGGACGAGTTTATAGTTTTAGCTACAGACGGAATTTGGGATGTTCTTTCAAACAAAGAGGTAGTTGACATTGTAGCATCAGCCCCAGCTCGTTGTGCAGCCCGGTCATTGGTTGAGTCTGCAACTGAAGCATGGAGATGCAAGCTTCCTTCTTCCAACATTGACGACTGTGCCGTTGTCTGTCTCTTCCTCGACTCGAACTTGAACGTTATGGCATCAGAGACAAATATTAAATACAAGGAGGTTAAATCAGCAATCCAAGCTGAGACGGCCACGGTAGATGATGTCTCTGGAGAGGACTAA 1212 44.22 MGSCLSAGSKEAITGSSVSSVLGASKQKDSDNVFEQQNQGEATVHRIPGRMFLNGSSEVASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANEDISEELGCKTEAVNNEDSTLEISWKEASSPLTQPEISEKLKESFLKAFQIMDGELKIQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDEDNSLQAVQLTIDLKPDIPGEAERILKCKGRVFAHQDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLSDKDEFIVLATDGIWDVLSNKEVVDIVASAPARCAARSLVESATEAWRCKLPSSNIDDCAVVCLFLDSNLNVMASETNIKYKEVKSAIQAETATVDDVSGED 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23326276 23328922 + CrPI670011_03g013280.1 Cre03g1328 493358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1328 403 ProSiteProfiles PPM-type phosphatase domain profile. 59 367 IPR001932 -
Cre03g1328 403 PANTHER PROTEIN PHOSPHATASE 43 366 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre03g1328 403 CDD PP2Cc 59 367 IPR001932 -
Cre03g1328 403 Pfam Protein phosphatase 2C 152 331 IPR001932 -
Cre03g1328 403 SUPERFAMILY PP2C-like 57 368 IPR036457 -
Cre03g1328 403 SMART PP2C_4 48 365 IPR001932 -
Cre03g1328 403 Gene3D - 55 373 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1328 Cre-Chr3:23326276 Cre11g1393 Cre-Chr11:17786343 1.40E-143 dispersed
Cre03g1328 Cre-Chr3:23326276 Cre02g0457 Cre-Chr2:1823589 1.20E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1328 - - - 0.0