Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1394 ATGTTAGTGAAATTACTTTTTTCTCATATTTTTCGGGAGCTGCAACTTGCAACCATAGATAATCCTTCAAATGCAGTGGAGTGGGCATTGGTAGAGTTACTCAATCAACCAAAAATTCTCCAAAGAGTTGTTGAAGAATTGGACAAAGTTGTTGGAAGAAATAGGTTGGTTCAAGAATCTGATATCCCTAATCTCAAGTATCTCACAGCTTGTATAAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCACGTTTCCAATTTTGACATTGTTGTGGGTGGCTATTTCATCCCAAAAGGTAGCCAAGTTTTGCTATGTCGTCTGGGTCTCGGCCGAAACCCAAGGATTTGGGAGGATCCAATGAGATTTGATCCAAAACGACATTTAAAAGATGGGACAGTTGAATTTGGAGTTTCAGAACCCAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGAGGTTGCATTGGTAGCTCACTTGGCACTAATATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCATGA 546 39.56 MLVKLLFSHIFRELQLATIDNPSNAVEWALVELLNQPKILQRVVEELDKVVGRNRLVQESDIPNLKYLTACIRESFRLHPFSPFNVPHVSNFDIVVGGYFIPKGSQVLLCRLGLGRNPRIWEDPMRFDPKRHLKDGTVEFGVSEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFS 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25997521 25998066 - CrPI670011_03g013940.1 Cre03g1394 493424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1394 181 PRINTS P450 superfamily signature 70 81 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS P450 superfamily signature 17 34 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS P450 superfamily signature 159 170 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS P450 superfamily signature 150 159 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 SUPERFAMILY Cytochrome P450 13 180 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 13 180 IPR051382 -
Cre03g1394 181 Pfam Cytochrome P450 13 181 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS E-class P450 group I signature 69 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS E-class P450 group I signature 110 134 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS E-class P450 group I signature 26 52 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS E-class P450 group I signature 149 159 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 PRINTS E-class P450 group I signature 159 181 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1394 181 Gene3D Cytochrome P450 6 181 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1394 Cre-Chr3:25997521 Cre03g1567 Cre-Chr3:31132391 1.70E-88 dispersed
Cre03g1394 Cre-Chr3:25997521 Cre03g1467 Cre-Chr3:28397609 3.70E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1394 - - - 0.0