Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1448 ATGGAGCATTTCTTAATCTCTCTCTTAATCCTCTTCCTCTTTTTCCTCTCTCTCACTTTCTTCATCCTCTTCCACAAACACAAATCCTTGTTCTCCTATCCCAACGTTCCTCCCGGCGCCATAGGCTTTCCCATTCTCGGTGAGAGCCTCGAGTTCTTGTCCACTGGCTGGAAGGGCCACCCTGAGAAGTTCATCTTCGACCGTTTGAATAAGTACAAGTCTGATGTCTTCAAAACCTCCATCGTCGGCGTTCCGGCCGCCATTTTCTGCGGCCCTGCCTGCAACAAGTTCCTCTTCTCTAACGAGAATAAACTCGTTACTTCTTGGTGGCCGGATTCCGTTAACAAGATCTTTCCCTCTTCCACTCAGACTAACTCCAAAGAGGAAGCTAAGAAACTCAAGAAATTCCTCCCGCAATTCCTTAAGCCGGAAGCGCTTCAGCGTTATATTGGAATTATGGATGAACTCGCTCAACGCCATTTCGCTTCCTTCTGGGAGAACAGGGAAGAGGTCCTTGTGTTTCCTCTCGCTAAAAGGTTCACATTCTCGCTGGCGTGCCGATTGTTCGTGAGCGTAGACGATGAAATCCAGGTGGAGAGATTATCGAGACCGTTTGAGCACATTGTGGCAGGAATCATATCGTTGCCGATCGATTTACCAGGAACGCCGTTCAATCGAGCAATAAAGGCATCGAATTTCATCAGAAAGGAACTGGTGGCGATCGTGAGGCAGAGGAAATGGGATCTGGCGGAAGGAAAGGCGTCGCCGACGCAGGACATTCTGTCTCACATGCTTCTCACGTGCGATGAGAACGGATTTTACATGAACGAGTCCGATATCGCCGATAAGATTCTGGGGCTGTTGATCGGCGGCCATGACACTACCAGTGTCGCATGCACCTTCATCCTTAAGTTCCTTGCTGAGCTTCCTCATGTGTACGATGGCGTCTACGCGGAGCAAATGGAAATAGCAAAAGCAAAAGCCCCAGGGGAAGCATTGAAGTGGGAAGACATAAACAAGATGAAATATTCATGGAATGTGGCCTGTGAGGTTCTAAGAATTGCTTCCCCAGTCCAAGGTGCCTTTAGGGAAGCCTTAAACGACTTCGTTTTTAATGGCTTCTACATTCCCAAGGGCTGGAAGCTATATTGGAGTGCAAATGGAACACACAAAAACCCAGAGTACTTCCCAGAGCCGTACAAGTTTGAGCCAGCAAGATTTGAAGGGAATGGGCCATTGCCCTACACTTACGTGCCTTTTGGGGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCAAAGCTTGAGATTTTGGTGTTCATGCATAATTTGGTCAAGAGATTCAAATGGGCAAAGCTACTTGAAAAGGAGAATATCATTGTTGACCCATTGCCAATCCCTCAAAAAGGTCTCCCCGTTCGCCTTTTTCCTCGTCAACCTCTATCTCTTTAG 1452 47.93 MEHFLISLLILFLFFLSLTFFILFHKHKSLFSYPNVPPGAIGFPILGESLEFLSTGWKGHPEKFIFDRLNKYKSDVFKTSIVGVPAAIFCGPACNKFLFSNENKLVTSWWPDSVNKIFPSSTQTNSKEEAKKLKKFLPQFLKPEALQRYIGIMDELAQRHFASFWENREEVLVFPLAKRFTFSLACRLFVSVDDEIQVERLSRPFEHIVAGIISLPIDLPGTPFNRAIKASNFIRKELVAIVRQRKWDLAEGKASPTQDILSHMLLTCDENGFYMNESDIADKILGLLIGGHDTTSVACTFILKFLAELPHVYDGVYAEQMEIAKAKAPGEALKWEDINKMKYSWNVACEVLRIASPVQGAFREALNDFVFNGFYIPKGWKLYWSANGTHKNPEYFPEPYKFEPARFEGNGPLPYTYVPFGGGPRMCPGKEYAKLEILVFMHNLVKRFKWAKLLEKENIIVDPLPIPQKGLPVRLFPRQPLSL 483
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 27734479 27742185 - CrPI670011_03g014480.1 Cre03g1448 493478
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1448 483 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 Pfam Cytochrome P450 37 452 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 PANTHER CYTOCHROME P450 26 35 455 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cre03g1448 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre03g1448 483 SUPERFAMILY Cytochrome P450 30 478 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 Gene3D Cytochrome P450 27 476 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 CDD CYP90-like 68 477 - -
Cre03g1448 483 FunFam Taxadiene 5-alpha hydroxylase 27 478 - -
Cre03g1448 483 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g1448 483 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1448 Cre-Chr3:27734479 Cre06g2279 Cre-Chr6:30715970 1.40E-187 dispersed
Cre03g1448 Cre-Chr3:27734479 Cre08g1540 Cre-Chr8:28014050 3.10E-65 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1448 K20667 - csv:101206033 864.759