Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre03g1467 | ATGAAAGCTGTTTTCTTATTCATCAGTCAATTGGCATACCAAAATTCCCCAATAGCCATATCCAAAACATTCATTGTGTTTGTATTTATGGCTTTTACTTCTATCATGTTATCCCAATGTTATAACCGCAGAAGAAAACACTCAATCCAGCAACCACCTCTCCCACCAGGCCCAAAGCCATTACCTTTTGTTGGTTGCCTCCCAGCAATGTTGTCGAGGAACAACTCCTCACCCCACCAATGGATTCATTCAGTAATGAAACAATTCAACACTGAAATTGCTTCCATACGCCTTGGGAATACTTACATAATCCCCATCACTTCTCCAGAACTCGCTCTTCAATTTTTCAAGACATATGATTCTGTCTTTGCATCACGTTCCTCAATTTCTAACGCTGTTGATATCTTATCCCGTGGATATATCTCCACGATATTCTCACCATTGGGAGACCAATGGAAGAAGATGAGAAGAATTCTGTCGTCAGAAGTACTCAATCCATCAACTCTCCACCGAATGCTTGCCCAAAGAACCGCTGAAGCTGATACTCTTTTACACTATATTTTCACCCAAACCAGTAGTAATGGAGGAGGTGCGGTGATTAACGTTAGAAGCATAGCACAACATTATTGCGGTAACATTATTCGAAGAATGCTATTCAATAGAAGATATTATGGCAAAGGGAAGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTTAGACATGTTAATGCATTCTCTATATCAGATTTCATGCCCTATTTGAAGCCTTTTGATTTAGATGGACATCAAAATATTATGAAGAATGCTTTGAATGTCCTTCGAAAGTATGACGACCCCATTATAGATGAGAGAGTGCAACAATGGAAGAAAGATGAAAAAATAGATGGGGTAGAGGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATGCAAATTCGTTGTTGACAATTGAAGAGATCAAGGCTCAAATCACAGACTTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGGCAATGGCAGAATTACTCAACCAACCAAAAATTCTCAAAAAAGCTGTTGAAGAATTGAATGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAACGTTCCTCACGTTTCCACCTCTGACATCGTTGTGGCTGGCTACTTTATTTCCAAAGGAAGTGAAGTGTTGCTCAGTCGTTTAGGTCTTGGTCGAAATCCAAGGATTTGGGAGAATCCAATGGGATTTGATCCAGAACGTCATTTAAAAAATGGGACAATTGAATTGGGGATTTCAGAACCCAATTTACAATTCATCACCTTCACTAGAGGGAGGAGAGGCTGTGCTGGTAGCTCACTGGGAACTAAAATTACCATGATGTTATTTGCTAGACTTCTACAAGGGTTTTCATGGAGTTTAATACCAAGAATCATGAAGATAGACCTTTCTGATACTGATGATCTTTCTCTCTCGAAGCCATTACATTTACGTGCAGAACCACGTTTATCTTATAGTATGTACCCAAGGCTTTCTTGA | 1638 | 39.13 | MKAVFLFISQLAYQNSPIAISKTFIVFVFMAFTSIMLSQCYNRRRKHSIQQPPLPPGPKPLPFVGCLPAMLSRNNSSPHQWIHSVMKQFNTEIASIRLGNTYIIPITSPELALQFFKTYDSVFASRSSISNAVDILSRGYISTIFSPLGDQWKKMRRILSSEVLNPSTLHRMLAQRTAEADTLLHYIFTQTSSNGGGAVINVRSIAQHYCGNIIRRMLFNRRYYGKGKEDGGPTFEEEEHNQALLTILRHVNAFSISDFMPYLKPFDLDGHQNIMKNALNVLRKYDDPIIDERVQQWKKDEKIDGVEDILDILISLKDENANSLLTIEEIKAQITDLQIATIDNPSNAVEWAMAELLNQPKILKKAVEELNEVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHVSTSDIVVAGYFISKGSEVLLSRLGLGRNPRIWENPMGFDPERHLKNGTIELGISEPNLQFITFTRGRRGCAGSSLGTKITMMLFARLLQGFSWSLIPRIMKIDLSDTDDLSLSKPLHLRAEPRLSYSMYPRLS | 545 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 28397609 | 28399653 | - | CrPI670011_03g014670.1 | Cre03g1467 | 493497 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre03g1467 | 545 | Gene3D | Cytochrome P450 | 48 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | SUPERFAMILY | Cytochrome P450 | 55 | 535 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 28 | 539 | IPR051382 | - | |
| Cre03g1467 | 545 | PRINTS | E-class P450 group I signature | 329 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | PRINTS | E-class P450 group I signature | 433 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | PRINTS | E-class P450 group I signature | 392 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1467 | 545 | Pfam | Cytochrome P450 | 55 | 522 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g1467 | Cre-Chr3:28397609 | Cre03g1564 | Cre-Chr3:31070250 | 2.10E-275 | dispersed | |
| Cre03g1467 | Cre-Chr3:28397609 | Cre03g1468 | Cre-Chr3:28410248 | 8.00E-94 | tandem | |
| Cre03g1394 | Cre-Chr3:25997521 | Cre03g1467 | Cre-Chr3:28397609 | 3.70E-80 | transposed | |
| Cre03g1395 | Cre-Chr3:25999452 | Cre03g1467 | Cre-Chr3:28397609 | 3.40E-90 | transposed | |
| Cre03g1467 | Cre-Chr3:28397609 | Cre07g1108 | Cre-Chr7:21198263 | 2.50E-47 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre03g1467 | - | - | - | 0.0 |