Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre03g1564 | ATGGAAGCTGCTTTGTTATTCATTAGTCAATTGGCACACCATTATTCAGCAATAGCCATATCCAAAACTTTCATTGTGTTTGTATTTATGGGTTTCATTTGTGTGATGTTTTCCCAATGTTATAACCTCAAAAGAAAACACTTAATCCGACAAGAAGCACCTCTTCCACCAGGCCCAAAGCCATGGCCTATTGTTGGGTGCCTCCCAGCAATGTTGTTGAGGAAAAATTGTCCAACACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCCTCCATACGCCTTGGAAACACTTACATAATCCCTATCACTTCTCCACAACTGGCTCTTCAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTCTTCCATTTCCAACACTGTTCATATCTTAAGTCGTGGATATCTCACCACAGCATTTTCGTCTATGGGACACCAATGGAAGAAGATGAGAAGAATTCTGTCATCAGAAGTACTCAATCCATCAACTCTCCACCGAATGCTTGCCCAAAGAACCGCTGAAGCTGATACTCTTTTACACTATATTCTCACCCAAACCAGTAGTAATGGAGGAGGTGCGGTGATTAACGTTAGAAGCATAGCACAACATTATTGCGGTAACATTATTCGAAGAATGCTATTCAATAGAAGATATTATGGCAAAGGGAAGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTTAGACATGTTAATGCATTCTCTATATCAGATTTCATGCCCTATTTGAAGCCTTTTGATTTAGATGGACATCAAAATATTATGAAGAATGCTTTGAATGTCCTTCGAAAGTATGACGACCCCATTATAGATGAGAGACTGCAACAATGGAAGAAAGATGAGAAAATAGATGGGGTAGAGGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATGCAAATCCGTTGTTGTCAATTCAAGAGATCAAGGCTCAAATCACAGAGTTACAAATTGCGACGGTAGATAATCCATCGAATGCAGTGGAATGGGCAATGGCAGAACTAATCAATCAACCAAAAGTTCTCCAGAAAGCTATTGAAGAACTAGACGAAGTAGTTGGAAGAAAAAGGTTAGTTCAAGAATCTGATATCCCAAAACTCAAATATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAACGTTCCTCACGTTTCCACCTCTGACACCGTTGTGGCCGGTTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTCAGTCGTTTAGGTCTTGGTCGAAACCCAAGGATTTGGGAGGATCCAATGACATTTGATCCAGAACGTCATCTAAAAGATGGGTCAATTGAATTGGGAATTTCAGAACCTGATCTACGATTCGTCACCTTTACTAGAGGGAGAAGAAGTTGCATCGGTAGCTCACTTGGGACTAACATTACAATGATGCTATTTGCTAGACTTCTACAAGGGTTTTCATGGAGCTTATTGCCAGGAGTCACAAAGATAGACTTCTCTCAAACCGATGAACACACTCTCCCAAAGCCATTGCATCTGCATGCAGAACCACGCTTATCTTATATTATGTATCCAACTTATTGA | 1638 | 39.93 | MEAALLFISQLAHHYSAIAISKTFIVFVFMGFICVMFSQCYNLKRKHLIRQEAPLPPGPKPWPIVGCLPAMLLRKNCPTHQWIHSVMKQFNTEIASIRLGNTYIIPITSPQLALQFLKTYDSVFASRSSISNTVHILSRGYLTTAFSSMGHQWKKMRRILSSEVLNPSTLHRMLAQRTAEADTLLHYILTQTSSNGGGAVINVRSIAQHYCGNIIRRMLFNRRYYGKGKEDGGPTFEEEEHNQALLTILRHVNAFSISDFMPYLKPFDLDGHQNIMKNALNVLRKYDDPIIDERLQQWKKDEKIDGVEDILDILISLKDENANPLLSIQEIKAQITELQIATVDNPSNAVEWAMAELINQPKVLQKAIEELDEVVGRKRLVQESDIPKLKYLTACARESFRLHPFSPFNVPHVSTSDTVVAGYFIPKGSEVLLSRLGLGRNPRIWEDPMTFDPERHLKDGSIELGISEPDLRFVTFTRGRRSCIGSSLGTNITMMLFARLLQGFSWSLLPGVTKIDFSQTDEHTLPKPLHLHAEPRLSYIMYPTY | 545 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 31070250 | 31072331 | + | CrPI670011_03g015640.1 | Cre03g1564 | 493594 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre03g1564 | 545 | PRINTS | E-class P450 group I signature | 393 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | PRINTS | E-class P450 group I signature | 434 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | PRINTS | E-class P450 group I signature | 350 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | SUPERFAMILY | Cytochrome P450 | 56 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 32 | 538 | IPR051382 | - | |
| Cre03g1564 | 545 | Gene3D | Cytochrome P450 | 48 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g1564 | 545 | Pfam | Cytochrome P450 | 56 | 527 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g1467 | Cre-Chr3:28397609 | Cre03g1564 | Cre-Chr3:31070250 | 2.10E-275 | dispersed | |
| Cre03g1564 | Cre-Chr3:31070250 | Cre03g1566 | Cre-Chr3:31119544 | 1.40E-260 | dispersed | |
| Cre03g1563 | Cre-Chr3:31030725 | Cre03g1564 | Cre-Chr3:31070250 | 5.9e-310 | tandem | |
| Cre03g1564 | Cre-Chr3:31070250 | Cre03g1565 | Cre-Chr3:31082935 | 6.40E-75 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre03g1564 | - | - | - | 0.0 |