Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1623 ATGGAGAATCTTATGATGGTTGATGATGCTTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGATAATATTGCAGAGAAAGATGTTAGTGATGAAGAAATTGATGCAGAGGATCTGGAGAGGCGTATGTGGAAAGACAGGATCAAGCTTAAAAGGATTAAGGAAAGAGAGAAGATTGCTGCACAACAGGCTGCGGAGAAGCAGAAACCGAAGCAGACATCTGACCAGGCTCGAAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAATATATGCTGAAACTGATGGAAGTATGCAAAGCTCGGGGATTCGTATATGGCATTATACCTGAGAAGGGGAAACCAGTTAGTGGTGCTTCTGACAACATCCGAGCTTGGTGGAAAGAAAAAGTTAAATTTGACAAGAATGGACCAGCTGCTATAGCCAAGTATGAAGCAGAATGTCTTGCCAGAGGAGAGGCAGATGGAAATGGAAATGGTAACTCCCAGAGCGTTCTTCAAGACCTTCAGGATGCAACGCTCGGGTCTCTTTTGTCTTCTTTGATGCAACATTGCGATCCCCCTCAGCGGAAGTACCCGTTAGAAAAGGGGGTTCCTCCACCCTGGTGGCCTTCTGGGAATGAAGATTGGTGGGTAAAGCTTGGACTATCCCATGGCAATAGTCCTCCTTATAAGAAGCCACACGATTTGAAGAAGATGTGGAAAGTGGGGGTCTTAACAGCTGTAATAAAGCATATGTCACCTGATATTGCAAAGATAAGGAGGCACGTACGGCAGTCGAAGTGCTTACAAGACAAGATGACTGCAAAGGAGAGCGCAATTTGGTTAGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGGCAACCGAGCAGTGATAATGGAGCTTCTGGAATAACAGAGACACCAGTAGGTGGTCGTGGTGAAAAGCAAGCTGCAGTAAGCAGTGAAAGTGACTATGATGTTGACCTTGCCGATGATGGTGTCGGGTCAGTTTCTTCTAAAGAGGACAGAAGACCACGATCCATGGATGTGGAGCCACCCAGTAATCTACCCAATAATGCTCCTCAACCTGCTGAAGGAAAGGAGCAAGGTGAAAAACAAAGGAGAAAAAGGCATCGTGGGGGCAGGACAAAGCCCGTCGATCAAACACTGGCTCCCTCTCGAAACGAAGAAGAACCATGTGTCGAACCAAGAACTACTCAGCTCGATATTAACCATTCTAATGTACCATTAGATAGATTTGAAATTCCAGGAAACCAACAACAAAAGGATACTGTCACAGCTTTGAGGCCACTCGAGAAGGATTTGGATGTCCAATCAGAAGTACCAGCTCCTCCGTTCAACATGCTCTCCGTGCCATCCTCTGATAATATCAATATAATTTCCACTCAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCTGTAATGCAGAATCCTGAGGTGCAACATGAAAGTGCTTACAATATTTATAATCCATCGGTCGATTATAGATCCAATTTTGATATGCAGCATTCTCAATTTGTTAATGAGCCTCAAATGAGATTGGAGGAAGGATTACATATTCCGACACAACATAGAAACGATGGGACGGTAGGAGAAGAATTCAACTATGTAAAAGAAACGTTCAACACAGAACAAGATCGGCCTGTTGATGCACAGTTTGGATCACCAATCAACAGTCTATCATTAGATTATGGAGCATTTAACAGTCCGTTCCATCTTGGGATCGACAGTTCAACCTCATTCGATGACTTGTTGGTTGATGACGATTTGATTCAATACTTCGGAGCATAA 1812 43.82 MENLMMVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIDAEDLERRMWKDRIKLKRIKEREKIAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLARGEADGNGNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLSHGNSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASGITETPVGGRGEKQAAVSSESDYDVDLADDGVGSVSSKEDRRPRSMDVEPPSNLPNNAPQPAEGKEQGEKQRRKRHRGGRTKPVDQTLAPSRNEEEPCVEPRTTQLDINHSNVPLDRFEIPGNQQQKDTVTALRPLEKDLDVQSEVPAPPFNMLSVPSSDNINIISTQSMYVDGRPLLYPVMQNPEVQHESAYNIYNPSVDYRSNFDMQHSQFVNEPQMRLEEGLHIPTQHRNDGTVGEEFNYVKETFNTEQDRPVDAQFGSPINSLSLDYGAFNSPFHLGIDSSTSFDDLLVDDDLIQYFGA 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32187983 32189794 - CrPI670011_03g016230.1 Cre03g1623 493653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1623 603 MobiDBLite consensus disorder prediction 62 85 - -
Cre03g1623 603 MobiDBLite consensus disorder prediction 333 347 - -
Cre03g1623 603 Pfam Ethylene insensitive 3, DNA-binding domain 40 287 IPR047091 GO:0003700(InterPro)
Cre03g1623 603 FunFam Ethylene insensitive 3-like 1 74 152 - -
Cre03g1623 603 Coils Coil 39 59 - -
Cre03g1623 603 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 566 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Cre03g1623 603 MobiDBLite consensus disorder prediction 289 402 - -
Cre03g1623 603 Gene3D - 160 298 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre03g1623 603 Gene3D - 74 150 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre03g1623 603 SUPERFAMILY DNA-binding domain of EIN3-like 168 290 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cre03g1623 603 FunFam Ethylene insensitive 3-like 1 161 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1623 Cre-Chr3:32187983 Cre08g0804 Cre-Chr8:21113576 3.70E-100 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53350 PF04873 EIN3 4.70E-127 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1623 K14514 - csv:101210347 1091.64