Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre03g1660 | ATGGTGAGGCAGCATAGAAGAAAGACCCGAGGAGAGGAAGAAAATGAGAAGGAGAGAGAGAATGAGAGGGAGAACGATGGCTTACCCAAGACGATTGACGATAGTGTGCAGCGATCGAAGACTGGTTGCAGAGGATTAACTTTCCTAGGGAACCACCACAACCATTTGCCCAACAAAACCTCACTATATGCTCTAAAATTTCCTATAGCTAGCCCCCCGTACTCCACCAATTTGGTCACCAACGCCGAATCTTTTCCCTCCTTCGCCCCTTCCCATTTAAAATCACACATGAGTCTCTCTAGAGAATTACACACCCGCACATGGATCCGAGGAGGAGACACAAAATACACGAGGATGCCAAAGGACCGACTAGATGAGATATGTGAGCATGCGTATTCACTTGCGCAAAACCTGGATCCTAATAGTGAAGGAAGAGGTGTTTTGCAATTCAAAACTGGTTTGATGTCTGTCATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAACCATAGATAGAAGCCAGGACATTACTCGGTTGCAGGAGTTCTACAAACTATACCGAGAGAAAAATAATGTAGATAAGCTTCGGGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGGTAATCTTGGAGAGTTGGAACGAAAAACGTTGAAGCGAAAAAAAGTCTTTGCAACCCTGAAAGTATTAGGAATGGTACTGGAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATCAGATGCAGCAATGACAGAGGACCTGATTGCATATAATATTATTCCATTAGATGCTCCTTCTATGACAAATGCTATTGGGTCCCTCGTTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCCGCAGAATTTTCTGTTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCACTTTTGGATTTCAGAAAGACAATGTGGCTAATCAGCGCGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGCCTTCGTATTCCTGAAGAAACTGAACCAAAGTTGGATGAAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGCTTGTCTGCTGTTAGCAAGGAAAAGAAGCTATTATTTATTGCCTTATACTTTCTTATATGGGGGGAAGCAGCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTTCGGGAAATGGATGAGGTATTGAGGCATCAGATTGCGCAGCCGGCCAAGAGCTGTGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTACGAGGTTATGGCTGCGGAAGCTGCAAACAATAATAATGGGCAGGCACCACATTCTGCATGGAGAAACTATGATGATTTTAACGAGTATTTCTGGTCACTTAGATGCTTTGACCTCAGTTGGCCATGGCACAAAGGCAAATCTTTTTTCCAAAAGCCAACACCGAAATCAAAGAATATGTTTGGTAGAAGTCGTCATCAAGGGAAAACGTCATTTGTTGAGCATCGGACTTTTCTTCATCTTTATCACAGTTTCCATCGTTTATGGATATTTTTGGTTATGATGTTCCAGGCTTTGACCATTCTTGCATTTAACAATGGAAGCTTTAATATGAAGACACTGCTCGAAGTTCTGAGTCTTGGTCCGACTTTTGTTGTAATGAAGTTTATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATACTCTACTTCAAGGCGTCTTGCTGTCTCTCGAATTTTTCTTCGTTTTCTTTGGTTTAGTATTGCATCAGCTTCGATAACATTTCTTTATGTGAAAGCTCTTCAGGAGGGGAGTAAACCAAATGCAGAAAGAGTGATGTTTAGACTATATGTAATTGTGATTGGAATATATGGTGGTGTGCAGCTTTGTCTCAGTATCCTCATGCGTATACCTGCTTGCCATCTTTTAACGAATCAATGTGATCGGTGGCCTCTTGTGCGTTTTATCAAGTGGATGCGTCAGGAACGGTACTATGTTGGACGTGGGATGTATGAGAGGACTACTGACTTTATCAAATACATGCTTTTGTGGATTATCATTCTGGGTGGAAAATTTGCATTTGCCTATTTTCTTCAGATCAAGCCTCTTGTTGAACCTACCAGGCTTATTGTAAATATGAGAGATATAAGATATTCGTGGCATGACTTTGTGTCTAAAAATAATCATAATGCTTTGACTATTCTTAGCTTATGGGCCCCTGTGGTCGCTATTTATATCTTGGACGTTCATGTGTTCTATACTATTATATCGGCTATTTGGAGTTTCTTAATTGGGGCAAGAGATCGTCTTGGTGAGATTAGATCATTGGAAGCCCTACATAAGCTGTTCGAGCAGTTTCCTGGAGCTTTTATGGACACTCTACATGTTCCTCTCCAAGACAGGCTTGGGTTTTCGAATCGGTCTTCAAGTCAGGTTGTTGAGAAAGACAAGTTCGATGCTGCTCGATTTTCTCCTTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAATTTGGAAATGGAGTTACTTCAAATGCCTAAAAACAAGGGTAATCTTCCCATGGTTCAGTGGCCCCTTTTTCTTCTTGCCAGCAAGATATTTCTAGCTAAGGATATTGCTGTTGAGAGACGAGATTCACAAGCCGAGTTGTGGGAGCGTATTTCAAGAGATGACTATATGAAATATGCAGTACAGGAATGTTACCACGCCATTAAGCTTATCTTAACGGAATTACTAGTTGGGGAAGGAAGGATGTGGGTTGAAAGGGTATTTGAAGACATTCAAGGTAGTATAGCAAACAATTCCATTATAAATGACTTCCAGCTAAATAAGCTGCCACTTGTGATTACAAGAATAACTGCTCTGACGGGTATTCTGAAAGAGCCAGAAACTTCGGAGCTGGAAAAAGGGGCTGTTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACTATGATATCCTTTTCGGTGACAAGAGGGGGCACTATGAAACATGGAACATATTAGTAAAAGCCAGAAATGAAGGTCGCTTGTTTACAAAGTTAAATTGGCCGAAAGATCCAGAATTGAAGTCACAAGTCAAAAGATTGCATTCCCTCTTAACCATTAAAGATTCAGCTTCAAATATTCCAGTTAATCTTGAGGCCCGACGAAGACTGCAATTCTTTACAAATTCACTTTTCATGGTGATGCCAACTCCAAAACCTGTTCGTCAGATGCTTTCCTTCAGTGTATTCACTCCATATTATTCCGAGACGGTGCTCTATAGTATGGGGGAACTCCTGAAGAAAAATGAGGATGGGATAACAACCTTGTTTTACTTGCAAAAAATTTATCCAGAAAAGGCAGGACCAAGGGGCCACCATGCAGGAAGAATGCCTCAAATTCAATTTACATTGTTCGCTCTACTAAACAAGACCTTCGAACCAAAGAATTTCACCTTCTTTTGA | 3576 | 41.11 | MVRQHRRKTRGEEENEKERENERENDGLPKTIDDSVQRSKTGCRGLTFLGNHHNHLPNKTSLYALKFPIASPPYSTNLVTNAESFPSFAPSHLKSHMSLSRELHTRTWIRGGDTKYTRMPKDRLDEICEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGTIDRSQDITRLQEFYKLYREKNNVDKLREDEMKLRESGAFSGNLGELERKTLKRKKVFATLKVLGMVLEQLSDAIPEEMKRLMESDAAMTEDLIAYNIIPLDAPSMTNAIGSLVEVQAAVSALKYFSGLPKLPAEFSVPETRSPDILDFLHFTFGFQKDNVANQREHVVHLLANEQSRLRIPEETEPKLDEAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSAVSKEKKLLFIALYFLIWGEAANVRFLPECLCYIFHHMVREMDEVLRHQIAQPAKSCESKDGVSFLDQVICPLYEVMAAEAANNNNGQAPHSAWRNYDDFNEYFWSLRCFDLSWPWHKGKSFFQKPTPKSKNMFGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQALTILAFNNGSFNMKTLLEVLSLGPTFVVMKFIESVLDILMMYGAYSTSRRLAVSRIFLRFLWFSIASASITFLYVKALQEGSKPNAERVMFRLYVIVIGIYGGVQLCLSILMRIPACHLLTNQCDRWPLVRFIKWMRQERYYVGRGMYERTTDFIKYMLLWIIILGGKFAFAYFLQIKPLVEPTRLIVNMRDIRYSWHDFVSKNNHNALTILSLWAPVVAIYILDVHVFYTIISAIWSFLIGARDRLGEIRSLEALHKLFEQFPGAFMDTLHVPLQDRLGFSNRSSSQVVEKDKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNKGNLPMVQWPLFLLASKIFLAKDIAVERRDSQAELWERISRDDYMKYAVQECYHAIKLILTELLVGEGRMWVERVFEDIQGSIANNSIINDFQLNKLPLVITRITALTGILKEPETSELEKGAVKAVQDLYDVVHYDILFGDKRGHYETWNILVKARNEGRLFTKLNWPKDPELKSQVKRLHSLLTIKDSASNIPVNLEARRRLQFFTNSLFMVMPTPKPVRQMLSFSVFTPYYSETVLYSMGELLKKNEDGITTLFYLQKIYPEKAGPRGHHAGRMPQIQFTLFALLNKTFEPKNFTFF | 1191 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 32991539 | 33038901 | + | CrPI670011_03g016600.1 | Cre03g1660 | 493690 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre03g1660 | 1191 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Cre03g1660 | 1191 | Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 | 397 | 504 | IPR026899 | - | |
| Cre03g1660 | 1191 | Pfam | 1,3-beta-glucan synthase component | 1085 | 1156 | IPR003440 | GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro) | |
| Cre03g1660 | 1191 | SMART | FKS1_dom1_2 | 395 | 507 | IPR026899 | - | |
| Cre03g1660 | 1191 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Cre03g1660 | 1191 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 119 | 1156 | - | GO:0005886(PANTHER)|GO:0046527(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g1660 | Cre-Chr3:32991539 | Cre06g2628 | Cre-Chr6:33864106 | 0.00E+00 | dispersed | |
| Cre03g1658 | Cre-Chr3:32948394 | Cre03g1660 | Cre-Chr3:32991539 | 6.90E-180 | proximal | |
| Cre03g1660 | Cre-Chr3:32991539 | Cre03g1662 | Cre-Chr3:33078338 | 1.50E-92 | proximal | |
| Cre03g1660 | Cre-Chr3:32991539 | Cre03g1663 | Cre-Chr3:33096475 | 1.00E-109 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre03g1660 | K11000 | - | csv:101216435 | 1945.63 |