Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1662 ATGGCAGTAGGTGCTGGGGAATGGTCTGTTGTCTGTGAGCATGCATATTCACTTGCGCAAAACCTGGATCCTAATGGTGAAGGAAGAGGTGTTTTGCAATCCAAAACTGGTTTGATGTCTGTCATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAACCATAGATAGAAGCCAGGACATTACTCGGTTACAGGAGTTCTACAAACTATACCGAGAGAAAAATAATGTAGATAAGCTCTGGGAAGGTGAAATGAAATTTAGGGAATCTGGTGCTTTCAGTGGTAATCTTGGAAAAAACATTGTCCTTGGCTCTCTTTATCTCCTTGGTGCTGCCTTTGCGAATCCAACAATGAATCTGTCCAACACTTGGTTGGAACGGAAAACGCTGAAGCGAAACAAAGTCTTTGCAACCCTGAAAGTATTAGCAATGGTACTGGCGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATTGGATGCGACAATGACAGAGGACCTAATTGCGTATAATATTATTCCATTAGATGCTCCTTCTGTGACAAATGCTATTGGGTCCTTGACTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCCGCAGAATTTTCCATTCCGGAGACCAGGAGTCCTGACATGCTTGACTTTCTACACTTCGTTTTTGGATTTCAGAATTCCCCTTCCAATGATGATATTCCAGCAGTCGGTCTCTCTCCCTCCAAAGTTCATAAAATCAAGAAACTCGAAGAAGTTATTGGTCAAAAAGCCAGCATACCCTTGGAAGATAAAACGTCAAACCCCAAAGGAAAGAGGAAGTTGTTCAGACCTTATCCTAAACACTACATTCGGAAGAAAACCACCTTCATCAACTCGTGGACAGCCATTGCAAACTCAGACATATTCGAAGAATGCTGTGTTAGAATTCAAATTCTGAGCAACAGCCATATCAGGTCAAAAAATCCTCATTTTAATAGTCACTCCTTCTCTCAATCAAAGTTCACTATTCCCGGCTCTAATGTGTCTTTTATTCGAGGAACCCCTTGCCGCGAGCCTGACTCCGATCAACACATCATTCAAGATGAAGATGGAGACTCGTTAATCAGTGTAAGCAGTGAAGATTTAGAAGTGTCTGACTTAGAAGACGCTTCGGAAGGGGTTGTCTTGTGGCCAGCTAGTGAAGATGATCTGAAGAAACTTTTTCAGTCAAAGGAGGGGTCTATCCATAACAAAGTTGAAAAGACCTCCTTCAAACAAATTGAGCAGCAGTCCATCCCCAAGCACCTACAACCATTAATACATGATTGCGACCTGATCTTCGGATCATAA 1356 42.7 MAVGAGEWSVVCEHAYSLAQNLDPNGEGRGVLQSKTGLMSVIKQKLAKREGGTIDRSQDITRLQEFYKLYREKNNVDKLWEGEMKFRESGAFSGNLGKNIVLGSLYLLGAAFANPTMNLSNTWLERKTLKRNKVFATLKVLAMVLAQLSDAIPEEMKRLMELDATMTEDLIAYNIIPLDAPSVTNAIGSLTEVQAAVSALKYFSGLPKLPAEFSIPETRSPDMLDFLHFVFGFQNSPSNDDIPAVGLSPSKVHKIKKLEEVIGQKASIPLEDKTSNPKGKRKLFRPYPKHYIRKKTTFINSWTAIANSDIFEECCVRIQILSNSHIRSKNPHFNSHSFSQSKFTIPGSNVSFIRGTPCREPDSDQHIIQDEDGDSLISVSSEDLEVSDLEDASEGVVLWPASEDDLKKLFQSKEGSIHNKVEKTSFKQIEQQSIPKHLQPLIHDCDLIFGS 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33078338 33088082 + CrPI670011_03g016620.1 Cre03g1662 493692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1662 451 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 13 237 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1662 Cre-Chr3:33078338 Cre10g1005 Cre-Chr10:18025951 5.20E-115 dispersed
Cre03g1660 Cre-Chr3:32991539 Cre03g1662 Cre-Chr3:33078338 1.50E-92 proximal
Cre03g1662 Cre-Chr3:33078338 Cre03g1666 Cre-Chr3:33133065 1.10E-16 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1662 K11000 - csv:101216435 331.643