Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre03g1663 | ATGAGGAAAGACATGAAAGACAATGTGTCTAATCAGCGTGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGACTTCGTATACTTGAAGAAACTGAACCAAAATTGGATGCAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGTTTGTCTGCTGTTAGCAAGGAAAAGAAGCTATTATTTATTTCCTTATACTTTCTTATATGGGGGGAAGCATCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTTTGGGAAATGGATGAGGTACTGATGCATCAGATTGTGCAGCCGGCCAAGAGCTGTGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTATGAGGTTCTGGCTGCGGAAGCTGCAAACAATAATAATGGGCAGGCGCCACATTCTGCATGGAGAAACTATGATGATTTTAACGAGTATTTCTGGTCACTTAGATGCTTTGACCTCAGTTGGCCATGGCATAAAGGCAAATCTTTTTTTCAAAAGCCAACACCAAAATCAAAGGTTTGA | 609 | 40.23 | MRKDMKDNVSNQREHVVHLLANEQSRLRILEETEPKLDAAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSAVSKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHHMVWEMDEVLMHQIVQPAKSCESKDGVSFLDQVICPLYEVLAAEAANNNNGQAPHSAWRNYDDFNEYFWSLRCFDLSWPWHKGKSFFQKPTPKSKV | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 33096475 | 33103234 | + | CrPI670011_03g016630.1 | Cre03g1663 | 493693 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre03g1663 | 202 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 6 | 197 | - | GO:0005886(PANTHER)|GO:0046527(PANTHER) | |
| Cre03g1663 | 202 | Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 | 77 | 184 | IPR026899 | - | |
| Cre03g1663 | 202 | SMART | FKS1_dom1_2 | 75 | 187 | IPR026899 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g1663 | Cre-Chr3:33096475 | Cre03g1670 | Cre-Chr3:33210913 | 1.10E-109 | dispersed | |
| Cre03g1660 | Cre-Chr3:32991539 | Cre03g1663 | Cre-Chr3:33096475 | 1.00E-109 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre03g1663 | K11000 | - | csv:101216435 | 385.956 |