Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1670 ATGGGAAAGGGTAAGGGTAGTTTTAGAAAGAGGAGGAACAAGACCCATACTCTCAATGTGCGGTGTGGCCACTGCAACTTCCATCTCCGGAAGAGTTGCTGTGCAGCCTGTGCTTTCCCTATTGCTCGCAAACAACTGGAACCGGAAGAATTAGGTACTTGCACCACGTTCCGCATAGATTTAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCATGAATACAGGAGCTGTAGCATCAACGTAAGGTTGGAATGGAAAACGTTGAAGCGAAAAAAAGGCTTTGCAACCCTGAAAGTATTGGCCCTGGTACTGAAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATTGGATGCGGCAATGACAGAGGACCTAATTGCGTATAATATTATCCCATTAGATGCTCCTTCTATGACAAATGCTATTGGGTCCTTGGCTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCTGCAGAATTTTCTATTCCGGAGACTAAGAGTCCTGATATACTTGACTTTCTACACTTCGTTTTTGGATTTCAGAAAGACAATGTGTCTAATCAGCGCGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGACTTCGTATACTTGAAGAAACTGAATCAAAATTGGATGCAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGTTTGTCTGCTGTTAGCAAGGAAAAGAAGCTATTATTTATTTCCTTGTACTTTCTTATATGGGGGGAAGCATCCAACGTCAGATTTCTCCCAGAATGCTTATGCTACATATTTCACCATATGGTTCAGGAAATGGATGAGATATTGAGGCATCGGATTGCGCAGCCAGCCAAGAGCTGTGAGTCTAAATATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTATGAGGTTCTGGCTGCGGAAGCTGCAAACAATAATAATGGGCAGGCACCATATTCTGCATGGAGAAACTATGATGATTTTAACGAGTATTTCTGGTCGCTTAGATGCTTTGACCTCAGTTGGCCATGGCATAAGGGCAAATCTTTTTTTCAAAAGCCAACACCAAAATCAAAGAGTATGCTTGGTAGAAGTCGTCATCAAGGGAAAACGTCATTTGTTGAGCATCGTACTTTTCTTCATCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTTATGACATTCCAGGCTCTGACCATTGTTGCATTTAACAATGGAAGCTTTAATATGAAGACATGGCTGGAAGTTCTGAGTCTTGGTCCGACATTTGTTGTAATGAAGTTTATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATACTCTACTTCAAGGCGTATTTTTGTTTCTCGAATTCTTCTTCGTTTTCTTTGGTTCAGTATTGCATCAGCTTCGATAATATTTCTTTATGTGGAAGCTCTTCAGGAAAGGAGTAAACCAAATGCAGAAAGAGTGATGTTCAGACTATATGTAATTATGATTGGAATATATGGTGGTGTACAGCTTTGTCCCAGTATCCTCATGCATATACCTGCTTGCCGTCTTTTAATGAATCAATGTGATTCGTGGCCTCTTGTTCGCTTTTTCAAGTGGATGCGTCAGGAACGGTACTATGTTGGAAGTGGGATGTATGAGAGGACTACTGACTTTATTAAATACATGCTTCTGTGGATTATCATTCTTGGTGGAAAACTTGCACTTGCTTATTTTCTTCAGATCAAGCCTCTTGTTGGACCTACAAGGCTTATTGTAAATAGGAGAGATATAAGATATTCGTGGCATGACTTTGTGTCTAAAAATATTCATAATGCATTGACTATTCTTAGCTTGTGGGCCCCCGTGGTTGTTATTTACATCTTGGACATCCATGTTTTCTATACTATTATATCGGCCATATGGAGTTTCTTAATTGGGGCAAGAGACCGTCTTGGAGAGTCACCAAAGATCAAAAGGATGGAGGTCTTGGGCTGGAAAATATGA 2082 40.83 MGKGKGSFRKRRNKTHTLNVRCGHCNFHLRKSCCAACAFPIARKQLEPEELGTCTTFRIDLRAASERVLKLHHEYRSCSINVRLEWKTLKRKKGFATLKVLALVLKQLSDAIPEEMKRLMELDAAMTEDLIAYNIIPLDAPSMTNAIGSLAEVQAAVSALKYFSGLPKLPAEFSIPETKSPDILDFLHFVFGFQKDNVSNQREHVVHLLANEQSRLRILEETESKLDAAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSAVSKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHHMVQEMDEILRHRIAQPAKSCESKYGVSFLDQVICPLYEVLAAEAANNNNGQAPYSAWRNYDDFNEYFWSLRCFDLSWPWHKGKSFFQKPTPKSKSMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMTFQALTIVAFNNGSFNMKTWLEVLSLGPTFVVMKFIESVLDILMMYGAYSTSRRIFVSRILLRFLWFSIASASIIFLYVEALQERSKPNAERVMFRLYVIMIGIYGGVQLCPSILMHIPACRLLMNQCDSWPLVRFFKWMRQERYYVGSGMYERTTDFIKYMLLWIIILGGKLALAYFLQIKPLVGPTRLIVNRRDIRYSWHDFVSKNIHNALTILSLWAPVVVIYILDIHVFYTIISAIWSFLIGARDRLGESPKIKRMEVLGWKI 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33210913 33246855 + CrPI670011_03g016700.1 Cre03g1670 493700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1670 693 Gene3D - 1 48 IPR011331 GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro)
Cre03g1670 693 SMART FKS1_dom1_2 264 376 IPR026899 -
Cre03g1670 693 Pfam Ribosomal protein L37e 3 44 IPR001569 GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro)
Cre03g1670 693 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 104 685 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cre03g1670 693 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 266 373 IPR026899 -
Cre03g1670 693 SUPERFAMILY Zn-binding ribosomal proteins 1 44 IPR011332 GO:0006412(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1663 Cre-Chr3:33096475 Cre03g1670 Cre-Chr3:33210913 1.10E-109 dispersed
Cre03g1670 Cre-Chr3:33210913 Cre06g2628 Cre-Chr6:33864106 2.70E-179 dispersed
Cre03g1665 Cre-Chr3:33109925 Cre03g1670 Cre-Chr3:33210913 1.90E-84 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1670 K11000 - csv:101216435 1099.73