Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1671 ATGTTGAGGCCTCTGTTTTCTAACCATGTCTGCATAGCTTACCTTATTGGTGTTGAACTTGAACAAGGCTTGAGGATGCTTGAGATTAGATCATTAGAAGCCATACATAAACTGTTTAAGAAATTTCCTGGAGCTTTTATGGACACTCTACATGTTCCTCTCCAAGACAGGCTTGGGCCTTCGAATTGGTCATCAAGTCAGGTTGTTGAGAAAGACAAGTTTGATGCTGCTCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAACTTGGAAATGGAGTTACTTCAAATGCCTAAAAACAATGGTAATCTTCCCATGGTTCAGTGGCCACTTTTTCTTCTTGTCAGCAAGATATTTCTAGCTAAGGATATTGCTGTTAAAAGACGAGATTCGCAAGACAAGCTGTGGAAGCGTATTTCCAGAGATGACTATATGAAATATGCAGTACAGGAATGTTACCACGCCATTAAGCTTATCTTAACGGAATTACTAGTTGGGGAAGGAAGGATGTGGGTTGAAAGGGTATTTGAAGACATTCAAGCTAGTTTAGCAAACAATTCCATTCTAAATGACTTCCAGCTAAATAAGTTGCCACTTGTGATTACAAGAGTAACTGCTCTGACGGGTATTTTGAAAGAGCCAGAAACTTCGGAGCTGGAAAAAGAGGCTATTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACCATGATCTCCTTTCCAGTGACAAGAGGGGGCACTATGAAACATGGAACATATTAGTAAAAGCCAGAAATGAAGGTCGTTTGTTTACAAAGTTAAATTGGCCCAAAGATTTAGAATTGAAGTCACAAGTCAAAAGATTGTATTCCTTGTTAACCATTAAAAAGACAACTTTAGATATTCCATTTAACTTTGAGGCCCAACGGAGACTGCAATTCTTTACAAATTCACTTTTCATGGTGATGCCAACTCCAAAACTTGTTCGTCAGATGCTTTCCTTCAGTGTATTCACTCCATATTATTCTGAGACGGTGCTCTATAGTATGGGGGAACTCCTGAAGAAAAATGAGGATGGGATAACAACCTTGCTTTACCTGCAAAAAATTTATCCAGATGAGTGGAAGAACTTTCTTGCTCGAATTGGCCGAGATGAGAATGAAGTTGACCTAGAATCGTTTGATAATCCTAATGACATCCTTGCATTGCGATTTTGGGCCTCTTATCGAGGACAGACATTAGCAAGAACAGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAGAGAGGAACTTATGGAGACTTCGAAGCTGCCATTCCTTGTACTGATGCTACTGATACTCGGGGTTTCGATTTATCTCCTGAAGCACGTGCACTAGCAGATCTTAAATTTACATATGTTGTGACATGTCAGATATATGGCAGACAAAGAGAACAACAAAAACCAGAGGCCGCTGACATTGCATTGCTTATGCAAAGAAATGAAGCCCTTCGTGTTGCCTACATCGATGATATTGAAACCCTGAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTTGTAAAGGCTGATATCAATGGAAAAGATAAGGAGATATATTCAATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAACCATGCTGTTGTTTTTACTCGTGGAAATGCTATTCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTCGAGGAATTTGATCATGATCATGGTATTCGTCCTCCTACCATACTGGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATCTCTTGCTTCATTCATGTCAAATCAAGAAGCTACTTTTGTGACTCTTGGTCAACGTATTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGAGTTTTTCATCTAACACGAGGTGGCATTAGCAAGGCCTCCCGTGTTATCAACATTAGTGAAGATGTCTTTGCAGGATTTAATACAACATTGAGGCAAGGGAACGTTACTCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAACCAGATTACTCTTTTCGAAAGAAAGGTTGCTGGTGGTAACGGAGAACAAGTTCTTAGCCGAGATGTATACAGGCTTGGCCAACTGTTTGATTTTTTCCGGATGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACTATGTTAACAGTGCTAACTGTATACATTTTTCTCTATGGAAAAGCATATTTGGCACTATTTGGAGTTGGTGAGACCATTGAAGATAGAGCTAATATTGCAAATATTATCACATTGTCAACTACTTTGAATACACAGTTCCTCATCCAAATTGGTATTTGCACTGTCGTGCCGATCTTAGGATTCATATCAGAGCAAGGTTTCTTCAAGACTATTGTCAGCTTCATAACCATGCAGCTTCAGCTTTGTTCTATCTTCTTCACATTCTCTCTTTGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGCGGTGCAAAGTATCAAGCAACTGGAAGGGGATTGGTGGTTCGCCATATCAAATTCTCTGAAAATTACAGATTGTACTCCCGCAGCCATTTTGTTAGAGGATTGGAAGCTGTGCTTCTGTTGGTTGTATACATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTAACTCTTAACAGTTGGTTCATGGCAATATCTTGGCTTTTTGCTCCCTATCTGTTCAATCCATCTGGGTTTGAGTGGCAGAAGACTGTGGAGGATTTCAGGGAATGGACCAATTGGCTCTTTTACCGAGGTGGAGTTGGTGTTAAGGGTGAAGAAAGTTGGGAATCATGGTGGGACTCAGAACTGGCACATATAAAAACCATTGAAGGGCGGATAGCAGAGACAATTTTAAATCTAAGATTCTTTCTTTTTCAATATGGAATTGTTTATAAGCTCCATGCACAAGGATCAAACACATCAGTGTCGGTATATGGGTTCTCCTGGATTGTGTTAGCTTGGCTTATAGTTCTTTTCAAGGTGTTTACCTTCAGCCAGAAGATGTCGGTCAATTTTCAGTTTTTGTTGCGATTTATCCAAGGATGGGGCATTCTTTCTATTGCAGTAGCTTGGAAACCTTTAATAAAGAAACTTGGACTCTGGAAATCCATTTGCTCAATTGCTCGGCTGTACGATGCCGGGATGGGGATGCTCATCTTTATCCCCATTGCATTCCTTTCATGGCTTCCATTTGTATCAACATTCCAAAATTTTCTTATGTTCAACCAGGCTTTCAGTCGAGGGCTCGAGATCTGTCTAACTCTTGCTGGAAAAAAACCCAACACTGCCCTATGA 3435 39.88 MLRPLFSNHVCIAYLIGVELEQGLRMLEIRSLEAIHKLFKKFPGAFMDTLHVPLQDRLGPSNWSSSQVVEKDKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNNGNLPMVQWPLFLLVSKIFLAKDIAVKRRDSQDKLWKRISRDDYMKYAVQECYHAIKLILTELLVGEGRMWVERVFEDIQASLANNSILNDFQLNKLPLVITRVTALTGILKEPETSELEKEAIKAVQDLYDVVHHDLLSSDKRGHYETWNILVKARNEGRLFTKLNWPKDLELKSQVKRLYSLLTIKKTTLDIPFNFEAQRRLQFFTNSLFMVMPTPKLVRQMLSFSVFTPYYSETVLYSMGELLKKNEDGITTLLYLQKIYPDEWKNFLARIGRDENEVDLESFDNPNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGTYGDFEAAIPCTDATDTRGFDLSPEARALADLKFTYVVTCQIYGRQREQQKPEAADIALLMQRNEALRVAYIDDIETLKDGKVHKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAVVFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFDHDHGIRPPTILGVREHVFTGSVSSLASFMSNQEATFVTLGQRILANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDVFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQITLFERKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALFGVGETIEDRANIANIITLSTTLNTQFLIQIGICTVVPILGFISEQGFFKTIVSFITMQLQLCSIFFTFSLCTKTHYFGRTILHGGAKYQATGRGLVVRHIKFSENYRLYSRSHFVRGLEAVLLLVVYMAYGYSSGGSLAYILVTLNSWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGVGVKGEESWESWWDSELAHIKTIEGRIAETILNLRFFLFQYGIVYKLHAQGSNTSVSVYGFSWIVLAWLIVLFKVFTFSQKMSVNFQFLLRFIQGWGILSIAVAWKPLIKKLGLWKSICSIARLYDAGMGMLIFIPIAFLSWLPFVSTFQNFLMFNQAFSRGLEICLTLAGKKPNTAL 1144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33251802 33283424 + CrPI670011_03g016710.1 Cre03g1671 493701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1671 1144 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1058 1139 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cre03g1671 1144 Pfam 1,3-beta-glucan synthase component 304 992 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1671 Cre-Chr3:33251802 Cre06g2628 Cre-Chr6:33864106 0.00E+00 dispersed
Cre03g1667 Cre-Chr3:33144544 Cre03g1671 Cre-Chr3:33251802 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1671 K11000 - csv:101216435 2005.33