Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1684 ATGTTCGGGATGGCGGCGGAGGCAGTGACGACCGTGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTCGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGAGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATACTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGCTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATATTTCTCCATCTTTACATCCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAATATTTCCATGGCTAATTCCTTCTTCTAA 513 42.11 MFGMAAEAVTTVAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYESCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFAEEYSPPISPPNLPNISPSLHPLIWPFSLLLSINISMANSFF 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33580065 33581195 - CrPI670011_03g016840.1 Cre03g1684 493714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1684 170 Gene3D - 31 133 IPR008972 -
Cre03g1684 170 FunFam Lamin-like protein 29 132 - -
Cre03g1684 170 PANTHER BLUE COPPER PROTEIN 17 129 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cre03g1684 170 SUPERFAMILY Cupredoxins 32 129 IPR008972 -
Cre03g1684 170 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055(InterPro)
Cre03g1684 170 Pfam Plastocyanin-like domain 42 123 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1684 Cre-Chr3:33580065 Cre10g1684 Cre-Chr10:31054948 9.10E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1684 - - - 0.0