Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1766 ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCGACCTTCCCAATCAGAGAAACATTTCACAGAGGACATTTTCCGGGAAAATTCCCAAATTATAAGCTCCGGCGAGATTACTCCGATTTGAAAGCTGCAAAGTCCGGCGTGTCCACCGTCTGTGAACCGCTCCCTCCCGACAGACCGCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTCCCTGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCAAGATGGGCAATGCTAGCCGTGGCCGGAATCCTACTACCGGAATGGTTCGAAAGCTTAGGATTGATACAAAATTTCTCATGGTACGACGCCGGAGCGCGCGAGTATTTTGCAGACCCGACGACATTGCTGGTGGTGCAATTGGCATTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCAGACTTGGTCAATCCGGGCAGCGTGGATGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAAAGCCAGACGTGGGCTACCCGGGCGGGTTTTGGTTTGACCCCATGATGTGGGGCAGGGGCTCGCCGGAGCCGGTCATGGTGCTACGGACTAAAGAGATCAAGAATGGGCGGTTGGCCATGTTGGCGTTTGTTGGATTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCGCTTGAGAATCTCGCCGCCCACGTGGCAGATCCTGGCCATTGCAACATCTTTTCGGCGTTTAGTTCGAGTTCGGGTTGA 798 55.64 MALSISSTALSTFPIRETFHRGHFPGKFPNYKLRRDYSDLKAAKSGVSTVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGAREYFADPTTLLVVQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSSSG 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34534707 34537786 + CrPI670011_03g017660.1 Cre03g1766 493796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1766 265 FunFam Chlorophyll a-b binding protein, chloroplastic 68 253 - -
Cre03g1766 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 257 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cre03g1766 265 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Cre03g1766 265 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Cre03g1766 265 SUPERFAMILY Chlorophyll a-b binding protein 57 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1766 Cre-Chr3:34534707 Cre11g1792 Cre-Chr11:29505023 1.20E-87 dispersed
Cre03g1766 Cre-Chr3:34534707 Cre01g1548 Cre-Chr1:28670063 3.60E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1766 K08908 - csv:101211430 531.561