Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1805 ATGAGGAAGGGAGGCTTCAGCAACAACCTAAATCTCAAGCTCAGTCTTCCTCAAGAAGAACAATCCATAGCGACGTTTTTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTCGTAAACAGAGATGGGGTTCGTATTGTTTCTCAAAGCGAAGTTGAAGCACCACCTCCGATTAAGCCTACAGATGATCAGTTGAGTTTAGCGGACATAGACATTATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTCAGATGAAAATTGAAGAGTCTCACCGCAAGCAGATTGCACAAGAACTGAAAATCAATCAATCAGCACAGTGCCCTTATATTGTTGTCTGTTACCAGTCTTTCTATGATAATGGATCTATATATATCATCCTAGAGTACATGGATGGAGGATCTTTAGCAGATTTTTTGAAAAAGGTTAAAAAGATTCAAGAACCATATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGTCGTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAGCCTTCAAATTTATTAATAAATCATAGAGGGGAAGTCAAGATTACAGACTTTGGTGTCAGTGCGATTATGGCAAGCACATCTGGGGAGGCTAATACTTTTGTTGGCACATATAACTATATGTCTCCAGAGAGAATTGTGGGAGAGAGGTATGACAATAAAAGTGACATTTGGAGCTTGGGCCTGATATTACTCGAGTGTGCAACTGGAAAATTTCCTTATTCTCCACCAGAACAAGATGGAGGATGGGTGAACTTTTATGAGCTTATGGAAGCCATTGTTGAAGGCGAACCTCCTTCTGCTCCGGCTGACCAATTTACTCCCAACTTCTGTTCGTTCATTTCTGCATGTGTGCAAACGGACCCAAAGGATAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGATCTCCACTTGCAACTTTCTAAATTTTATCTGTCGATCGTCTCTGGCTCGTACACGGGAATCTCAATTGTTTGCTGCTTGCAAGGATGGAGAAGGAATCCACCGCAATCTCACTTTCTCATGA 1122 41.71 MRKGGFSNNLNLKLSLPQEEQSIATFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKKIQEPYLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGEANTFVGTYNYMSPERIVGERYDNKSDIWSLGLILLECATGKFPYSPPEQDGGWVNFYELMEAIVEGEPPSAPADQFTPNFCSFISACVQTDPKDRLSARELLEHPFIKMISTCNFLNFICRSSLARTRESQLFAACKDGEGIHRNLTFS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34901700 34905561 + CrPI670011_03g018050.1 Cre03g1805 493835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1805 373 ProSiteProfiles Protein kinase domain profile. 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g1805 373 Pfam Protein kinase domain 73 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g1805 373 Gene3D Transferase(Phosphotransferase) domain 1 151 355 - -
Cre03g1805 373 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524(InterPro)
Cre03g1805 373 SUPERFAMILY Protein kinase-like (PK-like) 56 345 IPR011009 -
Cre03g1805 373 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 17 347 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cre03g1805 373 CDD PKc_MAPKK_plant_like 69 335 - -
Cre03g1805 373 FunFam Mitogen-activated protein kinase kinase 6 41 150 - -
Cre03g1805 373 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Cre03g1805 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g1805 373 FunFam Mitogen-activated protein kinase kinase 6 152 345 - -
Cre03g1805 373 SMART serkin_6 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1805 Cre-Chr3:34901700 Cre11g0697 Cre-Chr11:4058159 2.70E-125 dispersed
Cre07g1070 Cre-Chr7:15983830 Cre03g1805 Cre-Chr3:34901700 3.50E-37 transposed
Cre11g1591 Cre-Chr11:26097022 Cre03g1805 Cre-Chr3:34901700 6.20E-39 transposed
Cre11g0661 Cre-Chr11:3692369 Cre03g1805 Cre-Chr3:34901700 4.70E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63992 PF00069 Pkinase 5.00E-72 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1805 K20603 - csv:101204545 651.358