Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1825 ATGGAGGAGGTTCTGATTCTTCAGCTGGTGATTCTTTGTCTCTTCATTGCTGTTAATGCTTCCAACCTTGGGGAAATTGCTGGATTCAGCTACTCTCCACCCCCTTCAAGTTTTCAAGCATTTCCTCCGGTTTTAGGAACACCTGGTCCAGTCCAACATGAAAAATCGTTGATAATCAATGGACCAAGCTCAGCGCCTCAGCAAAATGATTCAACTTTGCAACCACCAGTTATGTTACCAGCAATTGCTCCAGGTCTGTTGCCTGATACGATCAAAGGGTTTATACCATCCGCTTCACCCCATGCTCCGACCGAGTCGCCACCATTTAATAGTATGCCTCAGCCACCTTTACCAGTTCAACCAAATGCACCATTGATTTCACCAAGTGCACCAGAACCAGAAGGTAAAGCACCAGCGAATGAGACTCCTCCGGCAATGGTTTCTCCAGATCCAGCTGTGTCATCTTCAAATTCTCCACATTATCCTCCAGCAAGTTCCCCGCATGAGCAAACAAATATTTCATCGAGTTCTCATCAAATCACTTCACCAAATGTAGCTCCAATCCCCGAGCCAATTTCCCCAGCGAGCAAGTTGCCCAAGAACTCACCAGCTAGTCATCCGGTAGTTCCTGAAAGACCTCCATCCATATTACCAGAGCCCAATATCTCTCCAATGGTGGCTATTTCCCCAAAAGCTGGTGACAGAAATAGATTAGAAGCACCAGCAGCTACACCTTATAATGCACTGCCCAAGTATATGCCACCTGTGTCTCATTCCCCAGAAGAAGCTCCTTCCAGTCACAATGACATGGGACATTCTCATGACGCCCAACAGCCGATCCTTCCACCACAAAAAGCTCCGTTTCATAGAGTAAATCTTTCTCCAACATCTCCTCCTTTGCCCTCAAATTATAAGCATCACAGAAGGAAGAATTATATCATCAGTCACGCACCTGCACCTGCACCATCATATCCAATTTCCTCCCCCACGACAAAAACGCCAGGTCCAGTTATTTCTACAGCACAACATTCGCCAGGCAGACGACATCATGCTCCACCTCCGGAATCAGAACCTTCGCCAATTTCTCCTTCACAATATGCTATGCCACCACCGCTTGTGACGCATGGTTCGCCTTCTCCTTCACCATACCAAAAAGTAGCTGGGCATGCTAGAAGACATTTTTATCCTCCGAAAGCTTCACCGCTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCAATTCATACGTTGCCTCCTCCACCTCCCAATGAAGATTGTTTAGCTACCCAGTGCACCGAGCCGTATACAAATACTCCCCCAGGATCTCCCTGCGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGTGTTTCGCTATATACCTTCTTCCCTCTGGTTTCAGAGCTGGCAGCGGAAATTGCTGTTGGGGTGTTTGTAAAGCAAAGCCAAGTTCGCATCATTGGAGCCAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTCCTTATTGATTTAGTTCCACTTGGCGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAGGTTTCGATCAAAACTTCCTATTTTGGGAACTATGAAGTATTATATGTTCGATATCCAGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGACTAGATAATGAGCCTTATTTCAGTAATAGTAATGATGCGAGGACAGTAAAACCAATCGGTGTTGATGTGCAGAACAGACAGCACAAAGATAGGCTAAGTGGTGGTATGATTGCCATCGTTGCCCTATCAACTACTGTTGCAGTGGTCTTATGTGTTGCAACTGCTTGGATTTTGCTCTTCAAACGCAATGATGGCCTTTGTCAGCCAAAACCGACTCCACATGTTTCGTTATCCTCCCTCAATAAACCATCAGGTGCTGGTGGATCAGTCATGGCAACCATGCCTAGTTCAGCATCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGGTCAGCCAAGACATTCAGCGCCTCTGACATTGAGAGAGCCACCAATGATTTTGATCCTTCAAGAATATTGGGAGAGGGTGGCTTTGGACGTGTTTACAGAGGCGTTCTTGAAGATGGTACCGAAGTAGCAGTCAAAGTTCTCAAGAGAGATGATCATCAGGGTGGTCGAGAATTCTTGGCTGAAGTGGAAATGCTTAGTCGTCTCCACCATAGAAATTTGGTCAAGTTGATTGGAATATGTACCGAGGAACGTAGCCGCGCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTGCATGGTGTTGATAAGGAAACTGCCCCACTTGATTGGGCTGCCCGGATCAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCAAGTCCTAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTGTTAGAAAATGATTTTACACCAAAGGTTTCTGACTTTGGGTTGGCTAGAACTGCAATGGATGAGGAAAGCAGACACATATCGACACGTGTCATGGGAACTTTCGGGTACGTGGCGCCAGAGTATGCAATGACTGGTCATCTACTTGTGAAGAGTGACGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTATTAACTGGCAGGAAACCAGTAGATATGTCGCAACCGCCCGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCTCTCCTCACAAGCAAAGAAGGCCTAGATGTTATAATTGACAAATCACTAGATTCTAATATTCCTTTCGAAAATATTGCTAAAGTGGCAGCCATTGCTTCAATGTGTGTGCAACCGGAGGTGTCACATCGACCTTTCATGGGCGAGGTTGTTCAAGCATTGAAACTAGTTTCCAACCAATGCAACAAGGCTCGAGAAACAAGCTCACTGGCTGGTTCAAGCCCAGAGAGTTCAACTATCAATACAAATGATGATGAGACATCAAGCTCAAGATACATGCTAGACTCTTTTCATAGTGAATATTTAATACCTAACTCAATTTCGAGTCTAGATGGCATTGATACACATCTCTCAATTTCAGACCTGTTAAATACTTCGATCGGTATCGGAATGCAGGAATCTAGATCGCTTGAAAGATGCTTCAGTTCCGATCCTCCTAGAATCGGAAAAAGCAGAAGGCAGTTCTGGCAAAGAATGAGAAGATACAACGGAAGTAGCATAAGTGAACATGGAATGCCTACTAGAATATGGTCAGCTTGGCAGTGCTCAATGCAACAACTTGTTGGAATTGTGGAGCAAAAGTTCAATCACTTGATTGATGAATTGGGCCATACAAGAACAGTTGTCCTCTAA 3354 45.14 MEEVLILQLVILCLFIAVNASNLGEIAGFSYSPPPSSFQAFPPVLGTPGPVQHEKSLIINGPSSAPQQNDSTLQPPVMLPAIAPGLLPDTIKGFIPSASPHAPTESPPFNSMPQPPLPVQPNAPLISPSAPEPEGKAPANETPPAMVSPDPAVSSSNSPHYPPASSPHEQTNISSSSHQITSPNVAPIPEPISPASKLPKNSPASHPVVPERPPSILPEPNISPMVAISPKAGDRNRLEAPAATPYNALPKYMPPVSHSPEEAPSSHNDMGHSHDAQQPILPPQKAPFHRVNLSPTSPPLPSNYKHHRRKNYIISHAPAPAPSYPISSPTTKTPGPVISTAQHSPGRRHHAPPPESEPSPISPSQYAMPPPLVTHGSPSPSPYQKVAGHARRHFYPPKASPLKPWAKSPKMPPIHTLPPPPPNEDCLATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAVGVFVKQSQVRIIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKTSYFGNYEVLYVRYPGLPQSPPSGDSGLDNEPYFSNSNDARTVKPIGVDVQNRQHKDRLSGGMIAIVALSTTVAVVLCVATAWILLFKRNDGLCQPKPTPHVSLSSLNKPSGAGGSVMATMPSSASLSFGSSIAPYSGSAKTFSASDIERATNDFDPSRILGEGGFGRVYRGVLEDGTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEERSRALVYELIPNGSVESHLHGVDKETAPLDWAARIKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSNIPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVSNQCNKARETSSLAGSSPESSTINTNDDETSSSRYMLDSFHSEYLIPNSISSLDGIDTHLSISDLLNTSIGIGMQESRSLERCFSSDPPRIGKSRRQFWQRMRRYNGSSISEHGMPTRIWSAWQCSMQQLVGIVEQKFNHLIDELGHTRTVVL 1117
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35163419 35169230 + CrPI670011_03g018250.1 Cre03g1825 493855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1825 1117 Gene3D Phosphorylase Kinase; domain 1 664 763 - -
Cre03g1825 1117 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524(InterPro)
Cre03g1825 1117 MobiDBLite consensus disorder prediction 355 377 - -
Cre03g1825 1117 Gene3D Transferase(Phosphotransferase) domain 1 764 983 - -
Cre03g1825 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g1825 1117 MobiDBLite consensus disorder prediction 101 128 - -
Cre03g1825 1117 FunFam Receptor-like serine/threonine-protein kinase ALE2 764 978 - -
Cre03g1825 1117 MobiDBLite consensus disorder prediction 206 220 - -
Cre03g1825 1117 SUPERFAMILY Protein kinase-like (PK-like) 668 963 IPR011009 -
Cre03g1825 1117 ProSiteProfiles Protein kinase domain profile. 688 964 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g1825 1117 MobiDBLite consensus disorder prediction 317 387 - -
Cre03g1825 1117 Pfam Protein tyrosine and serine/threonine kinase 692 961 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g1825 1117 MobiDBLite consensus disorder prediction 93 221 - -
Cre03g1825 1117 MobiDBLite consensus disorder prediction 249 305 - -
Cre03g1825 1117 MobiDBLite consensus disorder prediction 973 994 - -
Cre03g1825 1117 PANTHER OS01G0750732 PROTEIN 423 1004 IPR050885 -
Cre03g1825 1117 MobiDBLite consensus disorder prediction 149 186 - -
Cre03g1825 1117 CDD STKc_IRAK 694 962 - -
Cre03g1825 1117 FunFam receptor-like serine/threonine-protein kinase ALE2 661 763 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2434 Cre-Chr2:37710187 Cre03g1825 Cre-Chr3:35163419 1.30E-57 dispersed
Cre03g1825 Cre-Chr3:35163419 Cre06g0954 Cre-Chr6:3014227 1.00E-87 dispersed
Cre07g0511 Cre-Chr7:2886403 Cre03g1825 Cre-Chr3:35163419 4.80E-179 transposed
Cre10g1311 Cre-Chr10:26393469 Cre03g1825 Cre-Chr3:35163419 6.10E-105 transposed
Cre03g1825 Cre-Chr3:35163419 Cre07g2068 Cre-Chr7:36241445 4.30E-62 wgd
Cre03g1825 Cre-Chr3:35163419 Cre09g0060 Cre-Chr9:870886 2.00E-208 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63994 PF07714 PK_Tyr_Ser-Thr 2.80E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1825 - - - 0.0