Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1841 ATGGAGAAGGGTGATCTAGATGTGGCTGGGAAAGTGGTGGTTGTCGCCATTAAAGCCACCTCGAAGGAAGTTTCTAAGGCTGCTCTCGTTTGGGCTTTGACGCATGTTGTTCAGCCTGGAGATCATATTAAGCTCCTTGTGGTTATCCCTTCTCATCAATCAAGTAAATGGATGCGGGGATTTTCTCGACTTACTAGCGACTGTGCGATCGGTCATCTGAGAACTCCTTCAGGAACTTTTTCCGATCGGAAGGATGACATTGTGCATTCATGTTCTCAGATGGTACATCAGCTTCATGGTGCATATGACCCACTGAAGATAAAAGTCAGGATCAAAATTCTTTCTGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCGAACTGGGTGATATTGGATAAGAATTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATCTCAGCCTAAGGTTCTTCGTCTGAATTTGATGGAATCCCCTAAAATAAATACTAGAGAACCTTGGGTATCATCACATGAATTAGATGTTTCTCAGAAGTGTCTTAAAAGCTATTTCGATGAATCGATCATGTTTAGGGCTCCTGATGTGACTCCTGACAGTACTCCTGATGTAGAGTCTCCTCTTACCGTAACTGATATTGGAACATCATCAATATCGAGCTCAGATGTAGGCAGTTCATCCTTGTTCTCTGGGATTTGTGGCAGCTTGAGAAATGAATCCAGAACAGCAGCCGACGGAGGGAGAAATATGTCTGGTTCTGAATATGATTCTGAGAGCGAAAAGCAAACTCCCTCAGTTTCGTATTTCCAGCGTTGTATGGTTGATATCATAAGTTCCAGGCGTAAATTCCAGCAACGCGCAATGGAAGAATCACAAAATGCTCATCATAGACCTCCGGCTCCAACACGTCAAGGTCTGGTAAAAAAAATGCCTAATCTTTCTCTAGAACCTAGCACTGATGTGGCGCATTGCAATACCGAAATTAGCTCAAGCAGAAACATAAGGAACACGGTTTCGTTATCCAGAAAAGCACCTCTAGGCCCTCCTCCGCTGTGTTCTATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCTGAACTTGAAGTCGCTACAAGTGGGTTTGCACAAACAAATTTTTTGGCTGAGGGTGGATTTGGGTCTGTGCACCGAGGCGTCTTATCAGATGGACAAGTCGTTGCTGTCAAGCAATATAAACTGGCTAGTACCCAGGGAGATCGAGAGTTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGGAACGTTGTGATGCTCATTGGATTTTGTGTGGAGGGTGGAAGAAGGTTACTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTATATGGGAGAAATCGTGATCCACTGAAATGGTCTGCACGACAAAAGATTGCAGTCGGGGCTGCTCGAGGATTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGATATCCGCCCAAACAATATCCTCCTTACTCATGATTTCGAGCCACTAGTCGGAGATTTTGGGCTGGCAAGGTGGCAGCCGGATGGCGACCTAGCAGTAGAAACTAGAATCCTTGGGAGATTTGGCTACCTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACAGAGAAAGCTGATACATACTCGTTTGGCGTAGTGTTGCTGGAACTCGTGACTGGACGCAAAGCGATTGATTTAAATCGTCCCAAGGGCCAGCAATGCCTCACTGAATGGGCGCGAAACCTGTTGCGGAAAGATGCAATCTCCGAACTAGTCGATCCATGTTTGAGGAACTGTTATTCAGACGAGGAAGTTCACCGAATGCTGCAATGCGCTTCCTTGTGCATCAAGCGCGATCCGTACGTAAGACCGCGCATGTCTCAGGTGCTTCGGGTTTTGGAGGGCGACATCGTTTTGTAA 2016 45.49 MEKGDLDVAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDHIKLLVVIPSHQSSKWMRGFSRLTSDCAIGHLRTPSGTFSDRKDDIVHSCSQMVHQLHGAYDPLKIKVRIKILSGLARGMVATEAKKAQSNWVILDKNLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKINTREPWVSSHELDVSQKCLKSYFDESIMFRAPDVTPDSTPDVESPLTVTDIGTSSISSSDVGSSSLFSGICGSLRNESRTAADGGRNMSGSEYDSESEKQTPSVSYFQRCMVDIISSRRKFQQRAMEESQNAHHRPPAPTRQGLVKKMPNLSLEPSTDVAHCNTEISSSRNIRNTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEVATSGFAQTNFLAEGGFGSVHRGVLSDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKDAISELVDPCLRNCYSDEEVHRMLQCASLCIKRDPYVRPRMSQVLRVLEGDIVL 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35332085 35335952 - CrPI670011_03g018410.1 Cre03g1841 493871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1841 671 Gene3D Transferase(Phosphotransferase) domain 1 471 669 - -
Cre03g1841 671 ProSiteProfiles Protein kinase domain profile. 395 671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g1841 671 CDD STKc_IRAK 401 667 - -
Cre03g1841 671 SUPERFAMILY Protein kinase-like (PK-like) 378 663 IPR011009 -
Cre03g1841 671 MobiDBLite consensus disorder prediction 253 276 - -
Cre03g1841 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 367 470 - -
Cre03g1841 671 Pfam Protein tyrosine and serine/threonine kinase 399 664 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g1841 671 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g1841 671 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 471 671 - -
Cre03g1841 671 PANTHER OS01G0750732 PROTEIN 168 666 IPR050885 -
Cre03g1841 671 SMART tyrkin_6 395 665 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Cre03g1841 671 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1841 Cre-Chr3:35332085 Cre05g2105 Cre-Chr5:32934522 1.00E-143 dispersed
Cre03g1841 Cre-Chr3:35332085 Cre07g1723 Cre-Chr7:32687217 1.80E-228 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63995 PF07714 PK_Tyr_Ser-Thr 1.60E-41 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1841 - - - 0.0