Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1896 ATGGTTGTTCCTTTACCTAGGCAGATCGAATACACTGCTGCGTTGGCGGGTTGTGATTGGGCCGTAACGGTCAGTGTGGGAACAGTCAGCACAGGAAGCAATCACGAGCCGAATCGGACCAACGAGAATCCGTCGCCTGTAGCCGCGTCGTCCTCACCATGTGTTTCTGATAATCGCCCTGCAACTGCTCCGGGTCAGACTTCCGGCAACTCTCCGTCCAGTCCTTCATCGTCGCCATCGCTGGCAACAACTCCTCCAGGGGGTGGAAGCGTTACTCCGGTTTCGGTGCCTCCCAATCGCTCCGATTACTTTTCTTCAGAGGAGGAGTTTCAGGTTCAGCTTGCCCTAGCTATTAGCGCCTCGAATTCGGACTTCCGGGATGATCCGGAGAAGGATCAAATTCGAGCTGCGACACTTTTGAGCTTAGGAAATCATCGGATTGATTCTACTGCCAGGGACCAGGGAGATGCTGCTGAGGTGCTCTCGAGACAATATTGGGAATACAATCTGCTTGACTATGAAGAAAAAGTGGTCAATGGGTTTTATGATGTCCTTTCTACGGATTCGGCAGTCCAAGGAAAAATTCCATCTCTATCTGATATTGAAGCAAGCTTTGGTAGTTCTGGCTTTGAGGTCGTGATGGTCAATATGACTGTTGATCCTGCACTAGAAGAGCTGGTGCAAATTGCTCAATGTATTGCAGATTGCCCTGGCACTGAGGTCAGGGTTTTGGTTCAGAGGCTTGCTGAGCTTGTTATGGGACATATGGGGGGACCTGTAAAGGATGCCCATTTTATGCTAGCAAGGTGGATGGAAAGAAGCACAGAGTTAAGGACTTCTCTTCACACCAGTGTATTGCCTATTGGTTCCATTAATATTGGCCTCTCAAGACATCGTGCGTTACTTTTCAAGGTGTTAGCTGACAGTATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACTGGTGTTGAAGAAGATGCTGTCAACATTGTAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACACTTCTACCGGCAGACACATTTAGTGCGAAGGACACTACTAACTTTAATCCGTACAACCCCAAAGTAAGCAAAATTCCTTCTCTTCGCCACTCCAATGATGTTGGAATTTCTTCTGCAAAACCAACATCAGCACTTGAGGAAGGCAGCAGTCAGAACTTTGAAGCGGAGGCCATCTCACTGGTGGATGGGAAACTGAGCTATGGAAGGACAGAGTCTGTGCCGTCCAGCTCAGGTACTGGGACTTCTCGATGCAAGGGAGCCCATTTTGGTGAGGGTAATGCTAGACTGAATGTCAATGTAGTTCCATTTGGTCAAAGCTCCGAGGATTCCAAAAATCTTTTTGCGGATCTTAATCCTTTCCAAATAAAAGGAACTGGAAAAAGTTTCATTCCTAACAAATCCTCTGATAATAAAATTGAGGAGCTCCAGAAACCGAATATTGGGCATCCTCCTGTACCATTATGGAAAAATCGGGTTGCTTTCAATGCAGTTCCCAATAAAAATGAGTACGATTATATGGAGGGTCGTTTTCCAAGAGTTAGTCGCCGACCTAATGATCATAATATGGCATTGTCTTCTTCTTCCAACTCTACTGTCTCTGAAAATGTCAATCCTGGTGGTTCAGGAACATCTACTGACTTGAGTGTATCAATTAGAACTGCTGAAGTTGGAAGTTCTTCATCTAATATGAACTCACGGCCGACATCTGCAGTAATTAAACCTAATATTTTGCCTTTGATTGACGAACAGAACAGAAAGTCCAATGGAGAACATTCTGGAAATACAGACATGGAGGATGAAAAGGTAGATGCTATTGATGGACGCGATAATTTAATCAGATTTGATAGCCGTAGAAAGTTCACATATGATAGATCTGTTGGGACCAATTTGATATTGAAGGATCCGGGAAGTCCCAGCCTGTTGGTCAATCCAAGTTCGAATAGGTTTGAGCAAGTTTATGACGATGTGGATGTAGGTCAATGTGAAATCCAATGGGAGGACCTCATTATTGGTGAAAGGATTGGACTAGGTTCGTATGGAGAAGTCTACCATGCTGATTGGAATGGCACGGAGGTTGCTGTGAAGAAATTCTTAGACCAGGATTTTTCTGGCGCTGCTTTAGCTGAGTTCAAAAGAGAAGTACTGATAATGCGGCAGCTGCGTCATCCGAATATTGTTCTCTTTATGGGTGCTGTCACTCGTCCTCCCAACCTTTCCATTGTTACTGAGTTTCTTCCAAGAGGAAGCTTGTACCGGATCATTCACCGCCCACATTGTCAAATTGATGAAAAGCGCAGAATAAAAATGGCCCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGTACTCCAACAATTGTTCACCGAGATCTGAAATCACCGAATCTTTTGGTTGATAAGAACTGGAATGTGAAGGTATCAGATTTTGGGTTGTCACGCCTGAAGCACAATACGTTTTTATCATCCAAATCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAAGTCCTTCGGAACGAGCCTTCGAATGAGAAGTCGACGGTTAATTGTAGAATGGGAGGTATTTTCCTAAAGCTTGTCAACAACAGTGGAAACAGGACAACCTGGATGCGCAAGTGCGACGTTTATAGCTTTGGAATAATTCTATGGGAACTTGCTACATTGAGACTGCCTTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCAGTAGGTTTCCAGAATCGACGACTCGAAATACCCAAGGAAGTGGATCCCACGGTTGCAAGGATAATCTGGGAATGCTGGCAAACCGATCCGAACTTGCGCCCCTCATTCTCACAATTAGCCAATATTCTGAAGCCACTGCAGCGGCTCGTCCTGCCACCACATTCAGACCAGCCAAGTTCGTCGGTGCTGCAAGAGATTTCTTCTGCCTACTATTGGTTTGCCGTCGAAAATGAGACTTTGTTTGCCTCTTTCACCCTTTCACCCTCCAATAAAGAATGTGAATTGAATGGCACTTTTCGTTTCCAATTTGACCCTTTCGAGTGCAACAATTTTGAATTAGGAAAATCCCATTTCTCCTGA 3126 45.2 MVVPLPRQIEYTAALAGCDWAVTVSVGTVSTGSNHEPNRTNENPSPVAASSSPCVSDNRPATAPGQTSGNSPSSPSSSPSLATTPPGGGSVTPVSVPPNRSDYFSSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGNHRIDSTARDQGDAAEVLSRQYWEYNLLDYEEKVVNGFYDVLSTDSAVQGKIPSLSDIEASFGSSGFEVVMVNMTVDPALEELVQIAQCIADCPGTEVRVLVQRLAELVMGHMGGPVKDAHFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADSIKMPCRLVKGSHYTGVEEDAVNIVKLEDEREFLVDLMAAPGTLLPADTFSAKDTTNFNPYNPKVSKIPSLRHSNDVGISSAKPTSALEEGSSQNFEAEAISLVDGKLSYGRTESVPSSSGTGTSRCKGAHFGEGNARLNVNVVPFGQSSEDSKNLFADLNPFQIKGTGKSFIPNKSSDNKIEELQKPNIGHPPVPLWKNRVAFNAVPNKNEYDYMEGRFPRVSRRPNDHNMALSSSSNSTVSENVNPGGSGTSTDLSVSIRTAEVGSSSSNMNSRPTSAVIKPNILPLIDEQNRKSNGEHSGNTDMEDEKVDAIDGRDNLIRFDSRRKFTYDRSVGTNLILKDPGSPSLLVNPSSNRFEQVYDDVDVGQCEIQWEDLIIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNIVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPHCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKSTVNCRMGGIFLKLVNNSGNRTTWMRKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPTVARIIWECWQTDPNLRPSFSQLANILKPLQRLVLPPHSDQPSSSVLQEISSAYYWFAVENETLFASFTLSPSNKECELNGTFRFQFDPFECNNFELGKSHFS 1041
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 35979254 35992990 + CrPI670011_03g018960.1 Cre03g1896 493926
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1896 1041 SMART serkin_6 686 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g1896 1041 MobiDBLite consensus disorder prediction 599 618 - -
Cre03g1896 1041 MobiDBLite consensus disorder prediction 537 564 - -
Cre03g1896 1041 Pfam Protein kinase domain 689 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g1896 1041 CDD STKc_MAP3K-like 692 965 - -
Cre03g1896 1041 MobiDBLite consensus disorder prediction 532 564 - -
Cre03g1896 1041 MobiDBLite consensus disorder prediction 29 102 - -
Cre03g1896 1041 Gene3D Transferase(Phosphotransferase) domain 1 765 972 - -
Cre03g1896 1041 Pfam Ethylene-responsive protein kinase Le-CTR1 158 352 - -
Cre03g1896 1041 Gene3D Phosphorylase Kinase; domain 1 679 763 - -
Cre03g1896 1041 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g1896 1041 SUPERFAMILY Protein kinase-like (PK-like) 677 997 IPR011009 -
Cre03g1896 1041 FunFam Serine/threonine-protein kinase isoform 1 677 764 - -
Cre03g1896 1041 ProSitePatterns Protein kinases ATP-binding region signature. 692 714 IPR017441 GO:0005524(InterPro)
Cre03g1896 1041 MobiDBLite consensus disorder prediction 602 618 - -
Cre03g1896 1041 ProSiteProfiles Protein kinase domain profile. 686 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g1896 1041 PANTHER SERINE-THREONINE PROTEIN KINASE 85 966 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1896 Cre-Chr3:35979254 Cre05g1949 Cre-Chr5:31636477 8.20E-188 dispersed
Cre03g1896 Cre-Chr3:35979254 Cre04g1072 Cre-Chr4:29424234 9.20E-123 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63998 PF07714 PK_Tyr_Ser-Thr 4.40E-57 CL0016 Cre PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1896 - - - 0.0