Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1954 ATGGCATTCTCTATCTCCTTCCTCAAATCCTCCGCTCTCTTTCTCACCATTCTCTCTGTTTTCATCTTCTTCATCCTCTTCACTCCCAATCGCTCGCCGGAATCCGCATCCAGAAGGTCCCTCATTGCTGCCGTCGATTTCAATTCCAGTGTCCCTTCGATCCCATCTTGTTCCTCTGTTGAATCTCACTCCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCTTCTTTGATCAAAACCCATCTCTCTCTGTCCCTTTTCTCATTCTCTTTCTTCTCCTCCACTTCTACATCCTCATCAAAACTGCTCAAGATCACTTCTCCATTGTCACTTCCAAGCTTGCCTTTCACCTCAACTTGTCCCCGAGTATGGCCGCCGTGACGCTCTTGGCTTTGGGCAATGGCGCTCCGGATGTGTTTGCATCTGTTGCCGCGGTTCGTGGTGGTCAGTATCGAACTGGGTTCGGTGCAATTCTCTCTGCGGGCACGTTTGTTTCCGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCTCAGTTTGTGAGGGATGTGCTGTTCTATTTGACTGCAGCATTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGGTTTGTTGGGTTCTATCTGTTCTTTGTTGGATTGGTGTTTTGGATGGATTTGAGAATGGATAGTGGGAAAGCTAAGAGTGGGGCTGATATGGGAGTGACTAGAGAAGCTGAAATCTACCACGGTGAGTTGCCTCAAGACTGTGAGACTGGAGAAAGCTACAGAACTGTGGATGAAGGAAAAACCAATTCTGGCTTTTGGGAAGCTCTTCGAATGATCCCAAAAGCATGGGAAGCTCCTGTCTCGTTTCTTCTGAAGCTCACCATTCCCCAACCTGCACCTTCCCAATGGAGCAGATTCTTTACATCCGCGAATATTTCTCTTTGTCCCATTGCTCTTCTATATGCCTGTAACTCATTCATGTCGTTTAACCATCCCATTGCTTTCCTCTTACCAAATACACATTTACCTCTTTGGTTCGTAGTATTCTTAGCAAGCTCCTCTCTTGCAGTTCTGCACTTTGTCATGGAAACTGAACCCCCAAAAACTGAGCAAGTCCCTACTGTGCTTGCAGCATTTGTGATGAGTGTATTTTGGATTTCGACCACGGCTGGGGAACTTCTGAACTGTCTTGCAGCTCTTGGGGTGCTTCTCAAACTCCCAGCAGCTCTACTTGGGCTTACTGTGCTTGCCTGGGGAAATTCAGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCCTTGCTTGCTATGGCTGGATGCTTTGCAGGGCCAATGTTTAACATGCTTGTGGGGCTTGGTACAGCTTTAGTTATACAAACAGCTAACAGTTATCCGGAGGCGTATCAGCTTCAATTTCATATCGGAATTGTGATTGCATTCGTATTCCTACTTTTCAGCCTGATGGGCTCCCTACTTGTAATTATTTGGTACAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGTCTTGTGCTGCTGTACATTGTTTTCATGGCTGCCAGTTTACTGATGGCCAATCTAGACATAAAGCCATCTTATTTCCTCTCTGCTCAACAACCTGAAGGCACTTTTAAGTTGGCATGGTTGTTGGCTTGGAATCTGCTATGA 1710 46.49 MAFSISFLKSSALFLTILSVFIFFILFTPNRSPESASRRSLIAAVDFNSSVPSIPSCSSVESHSDGLVNYLYFHFCFFDQNPSLSVPFLILFLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLRMDSGKAKSGADMGVTREAEIYHGELPQDCETGESYRTVDEGKTNSGFWEALRMIPKAWEAPVSFLLKLTIPQPAPSQWSRFFTSANISLCPIALLYACNSFMSFNHPIAFLLPNTHLPLWFVVFLASSSLAVLHFVMETEPPKTEQVPTVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPAALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANSYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVIIWYRFRVPRFWGFCLVLLYIVFMAASLLMANLDIKPSYFLSAQQPEGTFKLAWLLAWNLL 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36606126 36609824 + CrPI670011_03g019540.1 Cre03g1954 493984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1954 569 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 51 539 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Cre03g1954 569 Gene3D - 121 251 IPR044880 -
Cre03g1954 569 Gene3D - 318 536 IPR044880 -
Cre03g1954 569 Pfam Sodium/calcium exchanger protein 91 232 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cre03g1954 569 Pfam Sodium/calcium exchanger protein 387 536 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1954 Cre-Chr3:36606126 Cre10g1718 Cre-Chr10:31413763 3.10E-48 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1954 K13754 - csv:101209909 919.072