Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1973 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTTATCTTCATTTCGATGCCTTTTTCATCGCAGAACTCCCACATTTTGATTGCTAACTCATTGTTGAATACAGCAGAGAGCTTCAATGTTAAAGAGCTAGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGTTTACAATTGGGAAATCAAAGCCCATCAGATCTTTCACCTTTGCCGTCGCCATTGCCGTCTCCATCACCAGCCGCCACTGCTCCTTCTCCTGTTCCTATGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAACTCCGCTTGCACAAGAGCCGACCAGTATACAAACCTAAAAGAAAAGAAGATCCAAAAGAAGGAAGAGTCAGAAAAATTCTTGTCGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGATATGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAGTTCAGAGAGAGGAATCCATGGAGAAGCATTCTGTTAAGAGTGAAAGAGAAGAGAAGACAGCAAGACCAAAATCTGGCCTTGATCTGTTCGATCTCGGTATGCTTGGAATGGATGTAGAAGAACAGACCCATACTTCTGTAAGTGAAAAGGAGTTATCTGTTCATAAAGAGGGGGAAAGGGACCAAGAGACGTTGGATTCAGAATCTGATAATGTAAGTGTTTCTTCAATCAAGGAAATGATGTATGTTCATGAGGAAGATGATAGTAAATCAATACAATGCGTATCTGATGGAACTCATTCCTCACCTGGGGATAGAGTTACTCCTGTTAAATGTTGTTCGTCTGATGATGAGGAATCATTCCATTCTTGTGGTGACTCCAATTTGTCGAATGCTCGCCTTTCAAATGCTTCCGGATCTTCTTCTGCGAATGTGATAACAAATTCTACTTGTTCTGTGCCAACTGTGAACTTATCAAGTAAATTGGAAATACAATGTGATGAATCTAACAAACTATTAACTTCTGACCATTCGCATCTTACCCTTTCTCCTTGTAGTTCAGAACCCAAAATGCAGATGGTTTCCCATTCAGTAGGTTGCCAAAAGAATGTCCTATCTTTATCTCCACCTCCTCCACCGCCACCACCACCGCCTCCGCCAGTCACTGATCGCAGTTCATTTTCCTTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCTTCTGCATTGTTAAGATCCTCATCTCCTGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATTTGCCATCACCTCAAACTGCTACTAAACCTTCACTACCATCATCTGCTATTCCTCCACCCCCTTCTCCACCTCCAAGTTTGAAAACAAACGCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTTGCGGCCAAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTACACCAGATCAATCAATGGTGTGGGACAAGCTAAGATGGAGCTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTTGGCTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGCCCTTCTCCAAGCAAACATATACTAGAGGCAAAAAGACTTCAGAACCTAACCATTCTCTTAAAAGCCCTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGTAGCGGGTTGCGTTTGAGACAACTTGAAGCACTGGTTAAGATGGTACCAACTCAAGAAGAAGAAGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATTAGGTTGTACAGAGAAGTTTGTCATAGCAATTCTGAGAATACCATTCGCCTTCCAAAGAATAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAACCATCTACGGAATTCATTTTCCATACTAGAGGAAGCCTGCAAGGAACTAAGATCCAGCAGACTCTTCCTGAAACTACTAGAAGCCGTGCTAAAAACAGGGAATCGAATGAACGTCGGAACAAGCAGAGGAGGCGCTAGAGCATTTAAACTAGACGCCCTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGCAAAACATCTCTACTCCACTTCGTGGTACAAGAAATAATCCGGTCTGAAGGAATCAGAGTATCGGGTAGCATAATGGGAAAAATCAACCAAAAAAACAAATCAAGAACCATGGAAGAAAGAGAAAACGATTACCGAAGAATGGGGTTAGATCTGGTATCGGGGTTGAGCACGGAACTGCAGAACGTGAAGCGAGCGGCGACGATCGATCTAAAAGTAGTTGGAAGCTCGAGGGGAAATCTGAATGAGGGAATGGGGAAAATGGAGAAACTGGTGGGGAAGGAGTTGAGTGTGGATGAAAGGAGTGGGAATTTCGTGGAAGCCATGAAAGGGTTTGTGGGCTATGTGAAGAAGAGGATGGAGGAAGTGAGGAAGGATGAAGAAAGGGTAATGTCGAGTGTGAGAGAGATTACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGTTGAGGATTTTTGTGATTGTGAGAGATTTTCTTGGAATGTTGGACAATGTCTGTAAGAGCTTCAAGATTGGAAGTTGA 2691 42.88 MGCVVKCVFMIVIFISMPFSSQNSHILIANSLLNTAESFNVKELERVSGEDESGGNEPFILERVRALLGLKSLQLGNQSPSDLSPLPSPLPSPSPAATAPSPVPMAAHRVHIHEHSHPHQLRLHKSRPVYKPKRKEDPKEGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKVQREESMEKHSVKSEREEKTARPKSGLDLFDLGMLGMDVEEQTHTSVSEKELSVHKEGERDQETLDSESDNVSVSSIKEMMYVHEEDDSKSIQCVSDGTHSSPGDRVTPVKCCSSDDEESFHSCGDSNLSNARLSNASGSSSANVITNSTCSVPTVNLSSKLEIQCDESNKLLTSDHSHLTLSPCSSEPKMQMVSHSVGCQKNVLSLSPPPPPPPPPPPPVTDRSSFSFSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPQTATKPSLPSSAIPPPPSPPPSLKTNAYSFKTPPPPPSKLPQFMAFGKEGNLRPKLKPLHWDKVRATPDQSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPSKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGSGLRLRQLEALVKMVPTQEEEAKLLSYEGDIGELGCTEKFVIAILRIPFAFQRIEAMLYRETFEDEVNHLRNSFSILEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKINQKNKSRTMEERENDYRRMGLDLVSGLSTELQNVKRAATIDLKVVGSSRGNLNEGMGKMEKLVGKELSVDERSGNFVEAMKGFVGYVKKRMEEVRKDEERVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36749257 36752344 - CrPI670011_03g019730.1 Cre03g1973 494003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1973 896 ProSiteProfiles Formin homology-2 (FH2) domain profile. 487 896 IPR015425 -
Cre03g1973 896 Coils Coil 648 668 - -
Cre03g1973 896 MobiDBLite consensus disorder prediction 375 482 - -
Cre03g1973 896 SMART it6_source 487 894 IPR015425 -
Cre03g1973 896 MobiDBLite consensus disorder prediction 216 244 - -
Cre03g1973 896 MobiDBLite consensus disorder prediction 79 138 - -
Cre03g1973 896 SUPERFAMILY Formin homology 2 domain (FH2 domain) 500 890 - -
Cre03g1973 896 Gene3D Formin, FH2 domain 486 893 IPR042201 -
Cre03g1973 896 MobiDBLite consensus disorder prediction 397 449 - -
Cre03g1973 896 MobiDBLite consensus disorder prediction 84 100 - -
Cre03g1973 896 MobiDBLite consensus disorder prediction 112 129 - -
Cre03g1973 896 MobiDBLite consensus disorder prediction 216 240 - -
Cre03g1973 896 Pfam Formin Homology 2 Domain 492 885 IPR015425 -
Cre03g1973 896 PANTHER FORMIN-RELATED 62 892 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cre03g1973 896 MobiDBLite consensus disorder prediction 379 396 - -
Cre03g1973 896 MobiDBLite consensus disorder prediction 450 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1973 Cre-Chr3:36749257 Cre11g0591 Cre-Chr11:3007334 8.80E-106 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1973 K28090 - csv:101208374 1410.59