Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g2022 ATGAAGCACTTGTTCTTGAAGTTCAATGAACTAACAAAGTCACTAAAAAGATGGAGAAACTCTGAAAATGCTTCTGATGTATGTGGGAGAGAAGCTGCAGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATCTGATCATCCATGGTTCCGGGAGTATGAATATCAATGGTTCGAGCAACTTTGTCTCGAGTTTTTCGAAGAGGGGTGAGAAAGGAATCAACCAGGACTGCTGCATTGTGTGGGAGGAATTTGGATGTCAAAAGGATATGATATTTTGTGGGGTTTTTGATGGCCATGGACCATGGGGTCATTTTGTTGCAAAGAAGGTTAGAGAGTCAATGCCAGCTGCTTTGCTTTGCAATTGGCAAGAAGCACTTGTTCAAACTTCTCTTCACCCACATTTGGAACTCAACTCAGCTAAAACACATCTTCATTTCAATTTGTGGGAGCATTCTTATATAGAAGCTTGTGCTGTGGTGGATCAAGAACTCGAGCAACACCGTAAAATCGACACGTTTCATAGTGGAACAACGGCCCTTTCCATTGTTCGACAAGGTGATACAATTGTCATAGCAAACCTTGGTGACTCCCGGGCCGTTTTGGCTACAACTTCTAATGATGGAAACTCGACGCCGTCACCAATTCAGCTCACTGTCGATTTCAAACCGAATCTACCTCAGGAAGCTGAAAGGATAACACAATGCAATGGGAGGGTTTTCTGCTTGCAAGATGAACCAGGGACTCCCCGTCTTTGGTTGCCGAACGGGGAAACGCCGGGGCTGTCAATGTCGAGATCGTTTGGCGATTTTTGCGTTAAGCATTTTGGACTTATTTCCGTGCCTGATGTAACACAAAGAAGTTTAACCAACAAAGACTTATTTGTTGTACTTGCAACTGATGGGATATGGGACGTCGTCACGAATCAAGAAGCTGTGCAGATCGTACATTCCACTGTTGATAGACAAAAATCTGCTCGACGACTGGTTGATTATGCTACTCGTGCATGGAAGCGGAAGAGGCCGAAAATTGCAACGGACGACATGTCGGTTATCGTCCTCTACCTACATTCTTCACCTTTGCATCAACAACCTTTTTGTGTATTGTAG 1107 44.08 MKHLFLKFNELTKSLKRWRNSENASDVCGREAAEAMAKSAKKKDLIIHGSGSMNINGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKKVRESMPAALLCNWQEALVQTSLHPHLELNSAKTHLHFNLWEHSYIEACAVVDQELEQHRKIDTFHSGTTALSIVRQGDTIVIANLGDSRAVLATTSNDGNSTPSPIQLTVDFKPNLPQEAERITQCNGRVFCLQDEPGTPRLWLPNGETPGLSMSRSFGDFCVKHFGLISVPDVTQRSLTNKDLFVVLATDGIWDVVTNQEAVQIVHSTVDRQKSARRLVDYATRAWKRKRPKIATDDMSVIVLYLHSSPLHQQPFCVL 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37204586 37206430 - CrPI670011_03g020220.1 Cre03g2022 494052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g2022 368 ProSiteProfiles PPM-type phosphatase domain profile. 61 355 IPR001932 -
Cre03g2022 368 PANTHER PROTEIN PHOSPHATASE 41 353 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre03g2022 368 CDD PP2Cc 60 355 IPR001932 -
Cre03g2022 368 Gene3D - 50 357 IPR036457 -
Cre03g2022 368 SMART PP2C_4 53 353 IPR001932 -
Cre03g2022 368 FunFam Probable protein phosphatase 2C 34 52 357 - -
Cre03g2022 368 Pfam Protein phosphatase 2C 86 334 IPR001932 -
Cre03g2022 368 SUPERFAMILY PP2C-like 58 356 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g2022 Cre-Chr3:37204586 Cre06g1248 Cre-Chr6:6383007 2.00E-96 dispersed
Cre03g2022 Cre-Chr3:37204586 Cre02g1841 Cre-Chr2:31693041 2.00E-141 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g2022 - - - 0.0