Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g2034 ATGGTTTGTGAAGAAGAAGCTGTAATCCAAAAGGTTTGTGAATTATATGATGAAATCTCAAGCCTTGAAAGCCTAAAACCTTGTAACCATGTCGACACTCTCTTCACTAAATTGGTGGTCACGTGCATGCCACCAACCTCCCCTCATTTCCATATCAATTCACTTTCAAAACCACTTCAACAAATGAGATCAAATCTCATTAGCCTTTGTGGTCAAGCTGAGTCTCTTTTAGAGTCTCATTTTTCCGATCTCTTAGCCAAATTTGATTCCCCTATTCACCATCTCCATGTCTTCCCTTACTTCTCTAATTACCTTAAACTTAGTCTCCTTGAATTCTCCATCCTTCGTCGCCACTGCCCCCTCGTGCCCTCTACCGTCGCCTTCGTCGGCTCTGGCCCTCTTCCTCTTACCTCCATCGTCCTCGCCACTCGCCACCTCACCTCCGCTGTCTTCCACAATTACGATCTCGACCCCCTTGCTAATTCAAAGGCGTCGAAGTTGGTGTCGCTTGACCCGGACCTGAAGACGAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACGGAGGAGCTGAAACAGTACGAGGTTGTGTTTTTGGCAGCTCTTGTAGGAATGGAGAAGGAAGAGAAATTGAAAGTGATTAAGCATTTGTCAGAGTTCATGTCAGAAGGAGCTTATTTGATGGTGAGAAGTGCTCATGGAGGAAGAGCTTTTCTATATCCTGTGGTTGAAGATTGTGATTTGGTAGGGTTTGAGGTTTTATCTGTGTTTCATCCCACTGATGAGGTTATAAACTCGGTAATAATTGCACGAAAAAAGACGAGTTTCGATAACGATAACGATAACGACAACAGTAACGATAACAACGACAAGAGTTGTTGTTTGTCTGTTAATTCAGATAAACAAGAGGAAGATAAGAATGAGGAGGTGATGATTAGTAGCAGTGGTATTGATCATAAGAATAATAACAATGGGGTTGTGCATAATAACAAATGTTCTGAGATTCAAAGCTTCAATAATCATGGAGGTAAGATTGAGGAATTTGCCATGGAAGCAGCAGCTGAGTAA 1071 42.67 MVCEEEAVIQKVCELYDEISSLESLKPCNHVDTLFTKLVVTCMPPTSPHFHINSLSKPLQQMRSNLISLCGQAESLLESHFSDLLAKFDSPIHHLHVFPYFSNYLKLSLLEFSILRRHCPLVPSTVAFVGSGPLPLTSIVLATRHLTSAVFHNYDLDPLANSKASKLVSLDPDLKTRMVFHTCDIMKVTEELKQYEVVFLAALVGMEKEEKLKVIKHLSEFMSEGAYLMVRSAHGGRAFLYPVVEDCDLVGFEVLSVFHPTDEVINSVIIARKKTSFDNDNDNDNSNDNNDKSCCLSVNSDKQEEDKNEEVMISSSGIDHKNNNNGVVHNNKCSEIQSFNNHGGKIEEFAMEAAAE 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37358506 37360230 + CrPI670011_03g020340.1 Cre03g2034 494064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g2034 356 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cre03g2034 356 Gene3D Vaccinia Virus protein VP39 7 275 IPR029063 -
Cre03g2034 356 Pfam Nicotianamine synthase protein 5 275 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cre03g2034 356 MobiDBLite consensus disorder prediction 276 310 - -
Cre03g2034 356 PANTHER NICOTIANAMINE SYNTHASE 3 5 304 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1814 Cre-Chr2:31466648 Cre03g2034 Cre-Chr3:37358506 7.20E-83 dispersed
Cre06g2196 Cre-Chr6:29771962 Cre03g2034 Cre-Chr3:37358506 4.00E-76 transposed
Cre02g1813 Cre-Chr2:31452405 Cre03g2034 Cre-Chr3:37358506 7.70E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g2034 K05953 - csv:101218907 569.696