Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g2049 ATGTGGAGCCAAGTTGTCATGGTTCTTAAAAGTTTGTTACTTGCTGAATGTGGTGGCTGGTGGGACTTAAATGGTGTGGTGTGGTGTTCCATGTTGAAGATGATAATGGTGGCTAAAGAAGAGCGAAGTCTCTCTCATTGCCATTTGCGCACGAGGTCCGTGGCATCGCAACGCAGCTTCTCAAGTTTTGGTGAAGTCCTATGTCCAAACTACACTAGGGTGCCTTTGGTTAACAGAAGTGGATTTGACCGGCAATACAAAATGGATTACCGGGGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGGCTATGCTCAGGAGCAGGGATCTCTTGCTGATGACTTTATTGATGATTTTCGCTTGCCCATCAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCAAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAATCTGGAATGAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAAGAAAATATCCAGCGGAAAAAACTTGATGTTGAGGTGGAAGAGACAGAAGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCATAATCATAGGAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGCTGGAGCAACAAGAAAGAGCAGCCGAGGCTCCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCGAAAGTAGCACCTGTAGCTTCAGTTTTCGGGAATGATAGCGATGACGAATAG 1161 42.46 MWSQVVMVLKSLLLAECGGWWDLNGVVWCSMLKMIMVAKEERSLSHCHLRTRSVASQRSFSSFGEVLCPNYTRVPLVNRSGFDRQYKMDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQMLEQQERAAEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37516803 37521050 - CrPI670011_03g020490.1 Cre03g2049 494079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g2049 386 MobiDBLite consensus disorder prediction 277 386 - -
Cre03g2049 386 Pfam G-patch domain 150 190 IPR000467 GO:0003676(InterPro)
Cre03g2049 386 MobiDBLite consensus disorder prediction 331 361 - -
Cre03g2049 386 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 88 386 - -
Cre03g2049 386 ProSitePatterns Zinc finger C2H2 type domain signature. 246 268 IPR013087 -
Cre03g2049 386 SMART G-patch_5 147 192 IPR000467 GO:0003676(InterPro)
Cre03g2049 386 ProSiteProfiles G-patch domain profile. 149 194 IPR000467 GO:0003676(InterPro)
Cre03g2049 386 SUPERFAMILY beta-beta-alpha zinc fingers 225 278 IPR036236 -
Cre03g2049 386 Coils Coil 307 327 - -
Cre03g2049 386 MobiDBLite consensus disorder prediction 277 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1107 Cre-Chr2:9755942 Cre03g2049 Cre-Chr3:37516803 1.20E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g2049 - - - 0.0