Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g2058 ATGACGGACGAGCGCGGGTTTGTGTGGTGGTGGCTGGTATTGGCGTTTGGGATCCGACGGTCAGAAACCACTTGTGACATCTGGTGCTTTACCCGCTGGAGCAGAGCCATGCCAAAGCCTTTGCTCCTTCTCTTTCTCTTATCACTGGCTTTTACCAAATGGGTTCATGCCTTTCTCCCCTATAACCTCTCTGGTTCTTCTCTCTTCGACTCTTATGAAACCTCCTTTGCTGCTACCCTTAAACCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCAGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATTAGGAACTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACTGGAATCCTGAGCAACAGAGCTGAAGAAAATCCCGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCCATGGAAGCATTGAGGGCAGAGGGAATGCGATTTGCTAAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTAGAGACTTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTACATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGGGAGCAGGAAGGAATCTGCCATCCGTTTGTACGAGCCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCCGCATACGATTCCTGGCAGATACAATCCAGTATAGCCCCACCTTCTCTGGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATCGAGCAGCGGTGAAAGCAATCGATTGTCCCTATCCTTGTGACAGGACTTGCCACCATCTGGCGAAGTCATATTGCAATTTGATTAAGAAGTCAATAAACAAGAAAGAAGAAGCTGCTGAGATGACAAATGTGATCTGCAGTCCTTCTGCAAACTTGTTTCAACATAGAAGAAAGGTTCGTATCATCATCCTCTAG 1470 44.76 MTDERGFVWWWLVLAFGIRRSETTCDIWCFTRWSRAMPKPLLLLFLLSLAFTKWVHAFLPYNLSGSSLFDSYETSFAATLKPLMVPLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALRAEGMRFAKQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVGLQGAGRNLPSVCTSHLDPTSCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLAKSYCNLIKKSINKKEEAAEMTNVICSPSANLFQHRRKVRIIIL 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37631942 37637937 - CrPI670011_03g020580.1 Cre03g2058 494088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g2058 489 PANTHER NOTUM-RELATED 69 444 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Cre03g2058 489 Pfam Pectinacetylesterase 81 427 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g2058 Cre-Chr3:37631942 Cre07g1480 Cre-Chr7:30029550 1.10E-126 dispersed
Cre03g2058 Cre-Chr3:37631942 Cre04g0913 Cre-Chr4:27808992 3.30E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g2058 K19882 - csv:101218273 816.609