Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0101 ATGGCGGATTTCCCAAGCTACATAATTCTCTTCCTCATATGGTTAGTTTCCACCTTCACAATTCGCTTCATCTTTGCCAAAAACAAACATAACTCTCGTCTTCCTCCAAGCCCTTTTGCTCTCCCCATCATCGGCCATCTCCATCTCCTCGGTCCGTTGCCCCACAAAGCTTTCCACAAGCTCTCGACCCGCCATGGACCCTTAATGCACCTCCGTTTAGGATCGGTCCCTTGCGTCGTAGTTTCGTCACCCGAAACAGCAAAACAAGTCCTCAAAACATTTGAATCTTCCTTCTCCAACAGACCCCATTTGTCAGCAGTTGACTATCTAACCTATGGCTCAGCTGATTTCTCCTTTGCTCCCTATGGACCTTATTGGAAGTTCATGAAGAAACTTTGTATGTCGGAGCTCCTCGGCGGCAGGACGCTCGACAGCCTCCGCCCCATGAGAGAGGACGAGATCCGGTGGTTTCTACGGTCATTGCAGTTGAAGGCCGCGGAGGGGAAAGAAGTTGATGTTGGAGGAGAGTTAATGAGGCTGAGCAACAATGTGATATCCAGAATGACATTGGGGAAAAGATGTGCTGAGGAAGAAGAAGAGGCTGAGGGGATAAGGAAATTAGTGAAGGATGTAGCTGAACTTTCAGGGACTTTTAATGTTTCAGATTATATTTGGTTTTGCAAGAATTTGGACTTGCAAGGGCTTGGGAAGAGGCTTAAGGAAGTTCATGAGAGGTTTGATGAGATGATGGAGAGAATGATAAAAGAACATGAAGAGAATAGTGGTGATGGGAAAGTGAAGGATTTGCTTGATATTTTGCTTCTTAAGTTTGGAGATCAAAACTCAGAGGTCAAGTTGACTAGAGAGAACATTAAGGCCTTTGTTATGGACATATTTACAGCAGGAACAGATGCATCAGCAATAACAATAGAATGGGCATTAGCAGAGCTAATAAACCATCCAAACATAATGGAGAAAGCAAGAGAAGAAGTTCACAGAGTTGTAGGAAAGAATAGAGTGATCGAAGAATCAGACATTGCCAATCTTCCTTATCTCCAAGCAATAGTAAAAGAGACCTTAAGGCTTCACTCAAGCCCATTGGTAGTAAGAGAATCAACTGAAAGTTGCACAATAAATGGTTATGAGATTCCACCAAAAACTCAAGTTTATGTGAATGTTTGGGCCATTGGGAGAGACCCAAATCACTGGGAAAACCCTCTTGAGTTTGAGCCAGAAAGGTTTATGGACAAAGAAGGGAGTGTGAATAGTGGTGATTTGAGAGGGCAAAATTTTCAGTTGTTGCCATTTGGGAGTGGGAGAAGAAGCTGTCCTGGAATAACTCTTGCTTTGCTAATGGTTCAAACAACTTTGGGTTGTATGATTCAATGCTTTGATTGGAAGGTTACTAGAGGAAATGGGAAAGTTGATATGGAAGAAGGGCCTGGCCTTACACTTCCTAGGGCACACCCTTTAGTTTGTGTTCCAAATCCTTGTCTAACTCCCTTTCCACCACTTTGA 1518 43.61 MADFPSYIILFLIWLVSTFTIRFIFAKNKHNSRLPPSPFALPIIGHLHLLGPLPHKAFHKLSTRHGPLMHLRLGSVPCVVVSSPETAKQVLKTFESSFSNRPHLSAVDYLTYGSADFSFAPYGPYWKFMKKLCMSELLGGRTLDSLRPMREDEIRWFLRSLQLKAAEGKEVDVGGELMRLSNNVISRMTLGKRCAEEEEEAEGIRKLVKDVAELSGTFNVSDYIWFCKNLDLQGLGKRLKEVHERFDEMMERMIKEHEENSGDGKVKDLLDILLLKFGDQNSEVKLTRENIKAFVMDIFTAGTDASAITIEWALAELINHPNIMEKAREEVHRVVGKNRVIEESDIANLPYLQAIVKETLRLHSSPLVVRESTESCTINGYEIPPKTQVYVNVWAIGRDPNHWENPLEFEPERFMDKEGSVNSGDLRGQNFQLLPFGSGRRSCPGITLALLMVQTTLGCMIQCFDWKVTRGNGKVDMEEGPGLTLPRAHPLVCVPNPCLTPFPPL 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 2256003 2258316 - CrPI670011_04g001010.1 Cre04g0101 494405
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0101 505 Pfam Cytochrome P450 35 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 FunFam Cytochrome P450 family protein 26 493 - -
Cre04g0101 505 CDD CYP93 66 495 - -
Cre04g0101 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre04g0101 505 Gene3D Cytochrome P450 25 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 SUPERFAMILY Cytochrome P450 28 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PANTHER CYTOCHROME P450 93A3-LIKE 8 496 - -
Cre04g0101 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g0101 505 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0101 Cre-Chr4:2256003 Cre10g1847 Cre-Chr10:33044805 2.30E-167 dispersed
Cre09g2184 Cre-Chr9:40894000 Cre04g0101 Cre-Chr4:2256003 1.40E-67 dispersed
Cre11g0523 Cre-Chr11:2202712 Cre04g0101 Cre-Chr4:2256003 4.10E-58 dispersed
Cre04g0101 Cre-Chr4:2256003 Cre09g0414 Cre-Chr9:4024105 1.10E-116 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0101 K24188 - csv:101213143 900.197