Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0330 ATGGCAGAGGCGGCGGCAGCCGGTTTCTGGCGGAAGCTATTAACCGGACGGTGGTTGATGCTATTTGCATCACTAACAATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCCCCCGCATCAAATCCATTTTTGGTTACGATCAGTCGGCTCTTAATTTGATCAGCTTTTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTGGCTCCACCGTGGGTGGTTCTCTCGGTCGGCGCCGTCCTCAACTTCTTCGCCTATTTCATGCTCTGGTTGGCAGTTTCCGGCCGGACCGCCGCACCGGGGCTGTGGCTGATGTGCGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTGGCCTTCTTAAAGGGTACATAGGTTTAAGTGGTGCAATAATGACACAACTTTATCAGGCCATGTATGGAGATGACCCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCCGCTGTCTCATTAGCTTCCCTTCCACTAATTCGAGTGATGAACACCAATGACCACCAAGCCAATGACCTCAAACCATTCTACACCCTTCTTTACATATCCATTGCTCTTGCCACCTCTCTCATCGCCATTATCATCCCTCAAACTAAATTTCACTTCTCTAAAACCCACTATATTGCCGCCGCTTCTCCCGTAGTTCTCTTTCTCCTCCTCCCACTCGTCGTTGTTGTTAACCAAGAACTCGCCCTCCACAATCACCCACCTCCAACGTCGATACAAGTACAACCGTCGTCACTGCACCCGACGATGACGACGACGACGACTCATTGGTACAAAAACATCTTCACCAGACGGCCCTCGCTTGGAGATGACCACACCATCTTGCAAGCAATTTTAAGCATGGACATGGCAATTCTATTTGTCGCGACAACGTGCGGCGTCGGAGGAGCATTGACAGTGGTCGATAATGTCGCACAAATCGGCGCATCGTTAGACTATCCAGCTCATAGCATTTCGAGTTTCGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAGTGGCAGGGTATGTTTCTGAATTTCTTTTGATGAAGTATGGATTACCTCGACCATTGATGCTCACTTTTGTAATACTAATGTCTTGCATTGGCCATATCTTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATCACTGGGTTTTGCTTGGGGGCACAACTGCCATTAACGGCCACGATCGTCTCTGATCTTTTTGGGTTGAAACACTATTCAACGTTGTACAACGTAGGATCTGTGTCAAGCCCTTTCGGATCCTACATTTTCAATGTTAGAGTGGCGGGTGGGGTTTATGATAGAGAAGGGGAAAGGCAAAGTAATGGGATCACAAAAGTGTGTAAAGGGGTGGGGTGTTATAGGCTTAGTTTTTTAATAATCATGGGGGCTTGTGTTTTTGGGAGTTTGGTTTCAATGGTTTTGGTTCGTAGGACAAGGAAGTTCTACAAAGATGACATTTATGCAAGGTTTAGAAAAGGAGAAGAAATCACAACACCACACACTACTACAACTACTACAACTACTCCTTCTACTTCTTGTACTCTTTCCTTCACACAACAAGGATAA 1692 46.99 MAEAAAAGFWRKLLTGRWLMLFASLTIMAMNGSGYMFGLYSPRIKSIFGYDQSALNLISFFKDLGGNLGVVSGLLYEVAPPWVVLSVGAVLNFFAYFMLWLAVSGRTAAPGLWLMCVYMGVAANSLSFANTAALVTCVRNFPLHRGCLLGLLKGYIGLSGAIMTQLYQAMYGDDPEGLILMIAWLPSAVSLASLPLIRVMNTNDHQANDLKPFYTLLYISIALATSLIAIIIPQTKFHFSKTHYIAAASPVVLFLLLPLVVVVNQELALHNHPPPTSIQVQPSSLHPTMTTTTTHWYKNIFTRRPSLGDDHTILQAILSMDMAILFVATTCGVGGALTVVDNVAQIGASLDYPAHSISSFVSLMSIWNFLGRVVAGYVSEFLLMKYGLPRPLMLTFVILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIVSDLFGLKHYSTLYNVGSVSSPFGSYIFNVRVAGGVYDREGERQSNGITKVCKGVGCYRLSFLIIMGACVFGSLVSMVLVRRTRKFYKDDIYARFRKGEEITTPHTTTTTTTTPSTSCTLSFTQQG 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9582130 9586526 - CrPI670011_04g003300.1 Cre04g0330 494634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0330 563 SUPERFAMILY MFS general substrate transporter 18 527 IPR036259 -
Cre04g0330 563 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 533 - GO:0016020(PANTHER)
Cre04g0330 563 Gene3D MFS general substrate transporter like domains 317 525 IPR036259 -
Cre04g0330 563 Pfam Nodulin-like 17 263 IPR010658 -
Cre04g0330 563 Pfam Major Facilitator Superfamily 342 522 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre04g0330 563 CDD MFS_Mch1p_like 16 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0330 Cre-Chr4:9582130 Cre08g0732 Cre-Chr8:20379496 7.40E-159 dispersed
Cre04g0330 Cre-Chr4:9582130 Cre10g2113 Cre-Chr10:35730619 5.10E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0330 - - - 0.0