Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0435 ATGGTTGTAATGGCGGCCGCCACCGTCTCATTTTGGACAGTGAAGTATCTACCTGGATTCTCAGGTCCTCTTCCATTCCAACTCGAAACTGGATACGTAGGCGTGGGAGATTGGGAGGAAGTTCAATTGTTCTATTACTTCGTGAAGTCACAAGGAAATCCCCAAAAGGATCCTCTAATGACTTGGTACATCGGAGGCCCCGGTTGCTCCGCTTTTAATGGACTCTTCGAAGAAATTGGTCCTCTAAATTTTAAGTTAGAGTTATACAATGGAACCCTACCTCAACTAATCTTGAATCCTCATACATGGGTTAAGAAAGCCAGTATATTATTTATAGACACACCTGTATACAGTGGATTTTCATATAGTCGAACCCCACAAGGTTCTAAGAAAGGAGACTTTAGACAGATTGAACAAAATCATCAATTTTTGAGAAAGTGGTTCGAAGCTCATCCTGAATTTATATCTAATCCCTTTTATGTTGGTGGAAGCTCATATTCTGGTATGATTGTTCCACCAATTACTCAAGCAATCTCAGAAGGAAATAAACATGTTGCTCCGGTTATAAACGTTCAGGGATATATTGTGGGAAATCCCGTTACCATACCTAATGCAGCCCAAAATGTTAGGATTCCTTTTGCTTATAGCATGAATCTCATCTCTACTAAATTGTATAAGTCATTGACAAGTAATTGCAAAGGAGAATATGTGAAGATTGATCCAAATAATGTGGAGTGCTTGAAGTATATAGCAACCTTCAAAAAGTGTGTGGATAGAATCAATTATTGGTGTATTTTGCTTCCTTCTTGTGTGGCTCCAATCCGAAGAATTGAACGGCGGAGATCTGTCTACAACACCTCTGAACTTGCTCCAAAAGCATTACCGACTAATACATCTCTTGACTGTCTTGGAACTATTAAAGAATGGGTAAGATGCAATATTACTGATGATTATGAATATGACCTTATGAGTGTTGTTCCTTATCATGCAAACCTCAGTTTAAAAGGTTATCGGTCTTTGGTTTTTAGTGGGGATCATGATATGACGGTGGCGACCATAAGCACTCAAACGTGGATTGAATCTCTAAATTATTCCATTGTTGATGATTGGAGACCTTGGTTTTCTCTAGATGACCAAATACTCGGATACACAACCACATATGCAAATAACATGACATTTGTGACCATTAAAGGTGGAGGACACACACCGGAATACATGCCACACCAATGCGACATAATGTTTAGCAGATGGATAAAAGGAGAAGCTTTATAA 1272 38.99 MVVMAAATVSFWTVKYLPGFSGPLPFQLETGYVGVGDWEEVQLFYYFVKSQGNPQKDPLMTWYIGGPGCSAFNGLFEEIGPLNFKLELYNGTLPQLILNPHTWVKKASILFIDTPVYSGFSYSRTPQGSKKGDFRQIEQNHQFLRKWFEAHPEFISNPFYVGGSSYSGMIVPPITQAISEGNKHVAPVINVQGYIVGNPVTIPNAAQNVRIPFAYSMNLISTKLYKSLTSNCKGEYVKIDPNNVECLKYIATFKKCVDRINYWCILLPSCVAPIRRIERRRSVYNTSELAPKALPTNTSLDCLGTIKEWVRCNITDDYEYDLMSVVPYHANLSLKGYRSLVFSGDHDMTVATISTQTWIESLNYSIVDDWRPWFSLDDQILGYTTTYANNMTFVTIKGGGHTPEYMPHQCDIMFSRWIKGEAL 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15212209 15226224 - CrPI670011_04g004350.1 Cre04g0435 494739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0435 423 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 417 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cre04g0435 423 FunFam Serine carboxypeptidase-like 19 7 276 - -
Cre04g0435 423 SUPERFAMILY alpha/beta-Hydrolases 13 421 IPR029058 -
Cre04g0435 423 Pfam Serine carboxypeptidase 18 420 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cre04g0435 423 Gene3D alpha/beta hydrolase 11 280 IPR029058 -
Cre04g0435 423 Gene3D - 286 422 - -
Cre04g0435 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 99 111 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cre04g0435 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 172 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cre04g0435 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 122 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cre04g0435 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 391 404 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0435 Cre-Chr4:15212209 Cre05g2829 Cre-Chr5:38963128 1.40E-183 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0435 K16296 - csv:101210918 496.508