Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0607 ATGGACTTCTTACAGTCTCTGGATCCTCAAATCCTTCTAGGTTTGGCTGTGGCTGTTTTAGCCCTTGCCGTTGGTGCTTTCTATGTATTATCCTCGTCCAAAAAAAGCAAATCCAGAGGTTGCTTGGATCCAGAGGTTTTCAAGGAGTTTAAACTTGTCAAGCGCCTGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCGAATCCTACTTCAGTTCTAGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTTATCAAACCGTACACACCTATTACTTTGGATTCTGATGTTGGATATTTTGAATTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCACACCATTTCCGCCAGATGCGTGTAGGCGATTTTCTTGCTGTAAAGGGGCCCAAGGGGCGTTTCAGGTATCAACCCGGCGAGGTCAGAGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACGCCTATGTATCAAGTTGCTCGAGCAATATTAGAAAATCCAAATGACAAGACGAAGGTACATCTCATTTATGCCAATGTCACCTATGAGGACATTCTCTTAAAGGAGGAGTTGGATCTTCTTACCAAAAGGTACCCGGATAGCTTCAAGCTCTATTATGTCTTAAACCAGCCTCCTGAAGCGTGGGATGGTGGCGTCGGATTCGTATCGAAGGAGATGATTCAAGCCCACTGCCCTGCTCCTGCTTCTGATATTCAGATTCTAAGGTGTGGGCCACCACCAATGAACAAGGCCATGGCTGCTCATCTTGAAGATCTTGGATATACACCTGAGATGCTGTTCATGTTCTGA 846 45.86 MDFLQSLDPQILLGLAVAVLALAVGAFYVLSSSKKSKSRGCLDPEVFKEFKLVKRLQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGEVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLTKRYPDSFKLYYVLNQPPEAWDGGVGFVSKEMIQAHCPAPASDIQILRCGPPPMNKAMAAHLEDLGYTPEMLFMF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23386556 23391889 + CrPI670011_04g006070.1 Cre04g0607 494911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0607 281 Gene3D - 140 281 IPR039261 -
Cre04g0607 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cre04g0607 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cre04g0607 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cre04g0607 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cre04g0607 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cre04g0607 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cre04g0607 281 FunFam NADH-cytochrome b5 reductase 139 281 - -
Cre04g0607 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cre04g0607 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491(InterPro)
Cre04g0607 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 278 IPR039261 -
Cre04g0607 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Cre04g0607 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 19 281 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Cre04g0607 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491(InterPro)
Cre04g0607 281 FunFam NADH-cytochrome b5 reductase 40 139 - -
Cre04g0607 281 Gene3D Translation factors 40 139 - -
Cre04g0607 281 CDD cyt_b5_reduct_like 50 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2727 Cre-Chr2:40403098 Cre04g0607 Cre-Chr4:23386556 1.10E-118 dispersed
Cre04g0607 Cre-Chr4:23386556 Cre10g1789 Cre-Chr10:32314845 4.80E-135 dispersed
Cre04g0607 Cre-Chr4:23386556 Cre03g1222 Cre-Chr3:13443942 5.70E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0607 K00326 - csv:101212569 529.635