Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0633 ATGGACGGAAAGGGAAATGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTCCAATTTGGCTATGCTGGGATGAACATCATCACCAAGGTAGCTCTCAACCGTGGAATGAGCCATTATGTTCTCGTCACCTATCGACAAGCTTTTGCCACGGTTGCCCTCGCTCCGTTCGCCTTCTTCCTTGAAAGGAAAGTGAGACCCAAGATTAGTTTCCCTATGTTGATGCAGATTTTCCTTCTGGGTTTGTTAGGGCCAGTGATTGATCAAAACTTTTATTATGCTGGACTGAAGCTCACTTCTCCTACCTTTTCATGTGCCATGAGCAATATGCTTCCTGCAATGACATTCATCTTGGCTCTTCTTTGTAGGATGGAGAAATTGGAGATGAAGAAAGTGAGATGCCAAGCAAAGGTGGTGGGAACATTGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCTCACCATAATTATCTTCACTCAACTACTTCTTCCAATTACTACTCTTTTGAAAGCACTTATCAAGATTGGGTAAAGGGTTCCATTCTTCTCCTTTTTGCCAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGGAATTACACAGCCCATCTTTCTCTTACAACCCTTGTGTGCTTCTTTGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAAAACAAAGCTTCTGTATGGAACATTGGATGGGACATGAATCTTCTTGCTTCTGTTTATGCTGGAGTAGTTTCATCAAGCATAGCTTATTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTTTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCATAATGGGCTCCTTCATGCTTGCTGAGAAGATGTATATCGGACGTGTTGTTGGAGGTGTTGCAATGGTGGTGGGGCTGTACTCGGTGCTATGGGGGAAATACAAAGATTACAAAGAAAAGGAAGCAATAATAGAAGAAAGCACCATGGTTGAACCAGTGAAGCTTTTAATAAGTGGAGGCAAATTAGTTGAGAATAAGAAGAAAAAATTAGCAACAGTGGTTGAAGAAGAAGAAGAAACGACATCAACATCATCAAACGACATTGAAATGCAAAGGAACAACACAACATCAAATGTCGACAATAATAATGTTTCAAAATTGCCTTGTCCTCCTCCACTACCCATTATTGTTGTTGTAGCTATGGATGAAGCACCACCAAAAGTTTGA 1296 41.44 MDGKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATVALAPFAFFLERKVRPKISFPMLMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTLVTVGGAILMTLYKGNVISFFWSHHNYLHSTTSSNYYSFESTYQDWVKGSILLLFANLAWALFFILQAMTLRNYTAHLSLTTLVCFFGTLQSMAVTFVMENKASVWNIGWDMNLLASVYAGVVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLAEKMYIGRVVGGVAMVVGLYSVLWGKYKDYKEKEAIIEESTMVEPVKLLISGGKLVENKKKKLATVVEEEEETTSTSSNDIEMQRNNTTSNVDNNNVSKLPCPPPLPIIVVVAMDEAPPKV 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23822504 23826434 - CrPI670011_04g006330.1 Cre04g0633 494937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0633 431 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Cre04g0633 431 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
Cre04g0633 431 PANTHER WAT1-RELATED PROTEIN 19 364 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre04g0633 431 MobiDBLite consensus disorder prediction 387 408 - -
Cre04g0633 431 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Cre04g0633 431 MobiDBLite consensus disorder prediction 380 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1796 Cre-Chr2:31274294 Cre04g0633 Cre-Chr4:23822504 5.00E-71 dispersed
Cre04g0633 Cre-Chr4:23822504 Cre10g1762 Cre-Chr10:32014096 6.30E-126 dispersed
Cre04g0633 Cre-Chr4:23822504 Cre11g1981 Cre-Chr11:31568705 2.90E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0633 - - - 0.0