Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre04g0641 | ATGGCTTCAAGACAAGTTCTTCCCCAACAAATCAGAGGCGAGGCAGCGATCGGTGGAGGAAAACAGGCAAAGGGCGCAGCGGCGGCAGATGCTAGGAACCGCCGAGCATTGGGTGATATTGGGAATCTGGTAACTGTTCGAGGAGTTGACGCAAAGGCAAATCGTCCTATTACAAGGAGTTTCTGTGCTCAGTTGCTTGCTAATGCCCAAGCTGCTGCAAAAGCTGAAAATAATAAGAAACAAGTACCTGTTAATGTAGATGGGGCTGCTCCCATTCTTGATGCTGGTGTTATGGCTGTTAAGAAAGCAGGAGCTCCCAAGCCAGCACATAAGAAAGTTGCAATTAAACCGACATCGGAGGTTATCGAGATAAGCTCGGACACAGTCGAAAAAGTTAAAGCCAAGGAAGTCAAATGTGCAAACAAGAAAAAGGAAGGAGAAGGGCCCTCAAAGAAGAAAGCACAGACTCTCACTTCAGTCCTAACTGCTAGAAGCAAGGCTGCCTGTGGTGTATCCAAGAAACCTAAAGAGGAGATTTTTGATATTGATGCTGCAGATGTTGGTAATGAGTTGGCAGCAGTTGAATATGTTGAGGACATTTACACTTTCTATAAAGAAGCCGAGAATGAGAGCAGACCTCATGACTATATGGATTCACAACCTGAGATAAACTCGACCATGAGGGCTATTTTGGTGGATTGGCTGGTTGATGTCCACAACAAATTCGAACTTTCGCCCGAAACTTTCTACCTCACGATCAATATAATCGATCGATTCCTTGCGACAAAAATAGTTCCAAGAAGGGAATTGCAATTGGTGGGCATTGGAGCCATGCTTATAGCCTCCAAATATGAAGAAATTTGGGCGCCTGAGGTAAATGACTTTGTGTGTCTTTCGGATAGAGCTTACACTCATGAACAGATACTAGTGATGGAGAAAAAAATACTTGGCAAGTTGGAATGGACCTTGACTGTTCCTACACCCTACGTTTTCCTCGCTCGATTCATCAAGGCGTCCAAGGACTCCAATCACGAGATGGAAAATCTGGTTTATTTTCTGGCTGAACTTGGTATAATGCATTACAATACGGCAATGATGTATTGCCCGTCCATGATTGCCGCCTCGGCAGTCTATGCGGCTCGATGCACCCTGAAGAAAACCCCTGCTTGGGATGACACCCTCAAACTGCACACTGGTTTCTCAGAACCTCAGATAATTGACTGTGCAAAACTTCTGGTGGGGTTCCATGGGGTAGCAGAGAAGAACAAGCTTCAAGTAATATACCGAAAGTACTCGAGCTCCGAGCGGGGAGCGGTAGCGTTGCTTCAGCCAGCCAAAGCTCTGTTGGCTCTCAATGGTGGTGCTGTCCATTGA | 1374 | 46.0 | MASRQVLPQQIRGEAAIGGGKQAKGAAAADARNRRALGDIGNLVTVRGVDAKANRPITRSFCAQLLANAQAAAKAENNKKQVPVNVDGAAPILDAGVMAVKKAGAPKPAHKKVAIKPTSEVIEISSDTVEKVKAKEVKCANKKKEGEGPSKKKAQTLTSVLTARSKAACGVSKKPKEEIFDIDAADVGNELAAVEYVEDIYTFYKEAENESRPHDYMDSQPEINSTMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLATKIVPRRELQLVGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTHEQILVMEKKILGKLEWTLTVPTPYVFLARFIKASKDSNHEMENLVYFLAELGIMHYNTAMMYCPSMIAASAVYAARCTLKKTPAWDDTLKLHTGFSEPQIIDCAKLLVGFHGVAEKNKLQVIYRKYSSSERGAVALLQPAKALLALNGGAVH | 457 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24012467 | 24014706 | - | CrPI670011_04g006410.1 | Cre04g0641 | 494945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre04g0641 | 457 | SMART | cyclin_7 | 233 | 317 | IPR013763 | - | |
Cre04g0641 | 457 | SMART | cyclin_7 | 330 | 414 | IPR013763 | - | |
Cre04g0641 | 457 | FunFam | G2/mitotic-specific cyclin-1 | 314 | 440 | - | - | |
Cre04g0641 | 457 | Gene3D | - | 199 | 440 | - | - | |
Cre04g0641 | 457 | SUPERFAMILY | Cyclin-like | 188 | 323 | IPR036915 | - | |
Cre04g0641 | 457 | Pfam | Cyclin, C-terminal domain | 326 | 444 | IPR004367 | - | |
Cre04g0641 | 457 | PANTHER | CYCLINS | 175 | 432 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cre04g0641 | 457 | ProSitePatterns | Cyclins signature. | 228 | 259 | IPR048258 | - | |
Cre04g0641 | 457 | CDD | CYCLIN_AtCycB-like_rpt1 | 176 | 321 | - | - | |
Cre04g0641 | 457 | PIRSF | Cyclin_A_B_D_E | 1 | 455 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cre04g0641 | 457 | Pfam | Cyclin, N-terminal domain | 199 | 323 | IPR006671 | - | |
Cre04g0641 | 457 | SUPERFAMILY | Cyclin-like | 327 | 447 | IPR036915 | - | |
Cre04g0641 | 457 | Gene3D | - | 213 | 324 | - | - | |
Cre04g0641 | 457 | SMART | Cyclin_C_2 | 326 | 445 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2568 | Cre-Chr2:38953356 | Cre04g0641 | Cre-Chr4:24012467 | 1.90E-111 | dispersed | |
Cre04g0641 | Cre-Chr4:24012467 | Cre11g2261 | Cre-Chr11:34371556 | 1.70E-68 | dispersed | |
Cre04g0641 | Cre-Chr4:24012467 | Cre05g1879 | Cre-Chr5:30930794 | 3.20E-43 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre04g0641 | K21777 | - | csv:101217210 | 752.281 |