Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0697 ATGATTAATGCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCGTCTCTTGGGGTTCTCACTTCCGTCCTGTCCTCGGCAGCCGGTGTTTATGGCCTTACGCTTCACCCGCTTCTTATCGTTACTACTCTTGTCTTCGTCCTTGTTTTCGTTTTTAATATAATTGGTGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGGTACTGCTGCTTTCTATGCTGCCGGCGTTGTTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCCCTGGCGATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTAAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAATTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTAGTCAGGGGTCCTTCCAGCCCAATTATTAAAACATTGTTGCTGGCAATGACCACCGTAGCGTTAATTGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCGTTCGGATGGGCATATATAAACAACAGGCATGATACATGGGAGCAGTTGTACGTGTACTGGATCGCCCCCTTCATAGGAGCGATTTTGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCACCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGA 732 48.22 MINAIKAAIGDAVLTSMWIFCASSLGVLTSVLSSAAGVYGLTLHPLLIVTTLVFVLVFVFNIIGAALGGASFNPTGTAAFYAAGVVPTSLFAMAIRFPAQAAGAVAGALAIKEVMPIQYKHMLGGPSLKVDIHSGATAEGILTFIISFAVLLIVVRGPSSPIIKTLLLAMTTVALIVAGSSYTGPSMNPANAFGWAYINNRHDTWEQLYVYWIAPFIGAILAAWLFRIIFPPPPPAPAKQKKA 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24930536 24934932 + CrPI670011_04g006970.1 Cre04g0697 495001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0697 243 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre04g0697 243 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre04g0697 243 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre04g0697 243 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre04g0697 243 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre04g0697 243 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre04g0697 243 PANTHER AQUAPORIN SIP1-1 1 242 IPR044222 GO:0015250(InterPro)
Cre04g0697 243 Gene3D Glycerol uptake facilitator protein. 2 235 IPR023271 -
Cre04g0697 243 FunFam Aquaporin SIP1-1 2 242 - -
Cre04g0697 243 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre04g0697 243 SUPERFAMILY Aquaporin-like 3 239 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0697 Cre-Chr4:24930536 Cre04g0992 Cre-Chr4:28495913 4.50E-12 dispersed
Cre04g0697 Cre-Chr4:24930536 Cre02g0759 Cre-Chr2:4443352 6.50E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0697 K09875 - csv:101220534 399.823