Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0731 ATGAAGGAAATTCATAAATCCCGTCTTGCATTTGCATTTGCATCTATCTCTGTTTTCGTTTGCTTGTTCTTCGATGTCCATGTGGTTTTAGCAGACAATTACATCCCTCGGGATTTCATCCTCCTTGATTGTGGAGGGCCTTCAACTGCTAACGACATCGATGGCCGGAAATGGTATACCGATGACAAATCTAAGTTTGTTCCGGCGACAGGGAATAGCATCGTATCGAAAGCCGCTACTCAGGATCCTTCAGTTCCTGATATCCCTTTCATGACGGCTAGGGTTTTCAGCTCTAATTTCACCTACAGCTTTCCTGTGGCTCCTAGTCGTTTATTCGTTCGTCTCTACTTTTATCCTTCTTCTTATGGTGGACTTAATGCATCTGATGCTCTTTTCTCTGTTTCCACTCCGTCCTATACTCTTCTTAAGAACTTCAGCGCTTCACAAACTGCTGAGGCTTTGAATTATGCCTATATCATTAAGGAATACTCTATCCATGTTGATGGTGATAGGTTAAACTTGACTTTCATTCCATCCTCCAGTCATCCAAAGGCCTATGCATTTGTGAATGGGATTGAGATTGTATCTATGGCTGATATTTACAGTGATACTTCTGGGAGTACTCTGATTGTTGGCCCATCTACTCCATTCACTGTGGACAATGCCACTGCGCTTGAGAATGTTTATCGGTTGAATGTCGGGGGGAATGATATTTCACCTTCTGGTGATACGGGGATGTATAGGTCTTGGTTTGATGACACTCCATACTTGTATGGTGCAGCACAGGGAGTGACGATGAGTACTGATCAGAACACAACACTTAATTATCCACCGAATATTCCTACTTATGTTGCGCCGGAAAATGTCTACTCCACTGCTAGAGCAATGGGACCTGATAACAATGTCAATCTGAATTATAACTTGACATGGATTTTCCCTGTTGACACTGGGTTCTTTTATCTTGTTAGGCTCCATTTTTGTGAGGTTGCTGCAAATATCACAAAAATTAACCAAAGAGTGTTCGACATTTTCCTCTTTAATCAAACTGCTATGCAGGGTGCTGACGTGATTGCCTGGGCTGGAAGTAATGATACTCCTGTGTACAAAGATTATGTGGTTTTCGTTCCTGCTAATGGAAGTCCGCAGCAGGATTTATGGCTCGAACTCCATCCAGACAAGTCCATGGTCCCCAATTACTATGATGCAATCTTGAATGGTGTGGAGATATTCAAAATTAATGACTCGAGCGCTAATCTTGCTGGGCCAAATCCTATTCCTGCGCCAGTACAGAAAGTTATTGATCCATCATTAGCTAAGCCAGCATCTTCTCATGGTAAATCAAAGAAGTCAGGGGTGATTGCTGGTGTTGTTTGTGGAGCAGTTGTTTTAGCTCTGATCATTGGTTTCTTTGTTGTTGCTAAACGTCGCCGTGGGCATGGGAAAGATTCAAGTACTGTTGAAGGACCGTCAGGATGGCTACCTCTTTCTCTCTATGGAAATTCCCATTCGGCTGGATCTGCTAAGACAAATACAACTGGAAGCTATACATCCTCCCTGCCTTCCAATCTTTGCCGCCACTTCTCGTTTTCTGAGATCAAGGCTGCCACAAGGGACTTTGATGAATCTTTACTACTTGGAGTTGGTGGTTTTGGCAAAGTTTACAAGGGAGAAATTGATGGTGGGACTACAAAAGTTGCCATCAAGCGAGGGAACCCTCTTTCCGAGCAAGGTGTGCATGAATTTCAAACTGAGATTGAAATGCTCTCTAAGCTTCGCCATCGCCACCTTGTTTCATTGATTGGCTACTGTGAAGAGAATTGTGAAATGATCCTGGTTTATGATTACATGGCTCATGGAACACTGCGAGAACATCTATACAAGACTCACAAGCCACCGTTGTCTTGGAGGCAAAGGCTCGAGATATGCATTGGAGCTGCCCGTGGTCTGCATTATCTCCACACTGGTGCCAAGTATACGATTATTCATCGAGACGTGAAGACAACCAACATCCTTTTGGACGAAAAGTGGGTAGCAAAAGTATCCGATTTCGGGTTGTCGAAAACTGGTCCTACTTTGGATCACACACATGTTAGCACTGTTGTGAAAGGTAGTTTCGGATACTTGGATCCTGAATACTTTAGGCGACAGCAATTGACCGACAAATCAGATGTTTACTCCTTCGGAGTCGTTCTCTTTGAAGTCCTATGTGCTCGGCCAGCCTTGAACCCAACACTCCCCAAGGAGCAAGTGAGTTTAGCCGAATGGGCTGCACACTGCTACAACAAAGGCATTTTAGATCAGATAATCGACACATTCCTAAAGGGGAAGATCGCATCGGAGTGTCTCAAGAAGTTCGCCGAGACAGCAATGAAATGTGTGTCTGATCAGGGCATCGACAGGCCATCAATGGGTGACGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGAGCGCAGAAGAGAGTGGCAAGGTAGGCAGTGGGATAGAAGTGGAAGGAGGTCAGCTCGACGTAGTTTACAAAGGGAAGAAGGATCCAGACGCTTCCCCTGGCATCGATGGAAACATAACCGACTCAAGAAGCACCGGAATCAGTATGAGCATTGGAAGCCGGAGTCTTGCCAGTGAAGATTCGGACGGGTTGACGCCAAGTGCCGTCTTCTCACAGATTATGAACCCAAAAGGTCGTTAA 2694 44.8 MKEIHKSRLAFAFASISVFVCLFFDVHVVLADNYIPRDFILLDCGGPSTANDIDGRKWYTDDKSKFVPATGNSIVSKAATQDPSVPDIPFMTARVFSSNFTYSFPVAPSRLFVRLYFYPSSYGGLNASDALFSVSTPSYTLLKNFSASQTAEALNYAYIIKEYSIHVDGDRLNLTFIPSSSHPKAYAFVNGIEIVSMADIYSDTSGSTLIVGPSTPFTVDNATALENVYRLNVGGNDISPSGDTGMYRSWFDDTPYLYGAAQGVTMSTDQNTTLNYPPNIPTYVAPENVYSTARAMGPDNNVNLNYNLTWIFPVDTGFFYLVRLHFCEVAANITKINQRVFDIFLFNQTAMQGADVIAWAGSNDTPVYKDYVVFVPANGSPQQDLWLELHPDKSMVPNYYDAILNGVEIFKINDSSANLAGPNPIPAPVQKVIDPSLAKPASSHGKSKKSGVIAGVVCGAVVLALIIGFFVVAKRRRGHGKDSSTVEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEIKAATRDFDESLLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTHKPPLSWRQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLPKEQVSLAEWAAHCYNKGILDQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKVGSGIEVEGGQLDVVYKGKKDPDASPGIDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25517845 25520538 - CrPI670011_04g007310.1 Cre04g0731 495035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0731 897 ProSiteProfiles Protein kinase domain profile. 539 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g0731 897 MobiDBLite consensus disorder prediction 843 897 - -
Cre04g0731 897 Pfam Malectin-like domain 42 412 IPR024788 -
Cre04g0731 897 Gene3D Transferase(Phosphotransferase) domain 1 616 829 - -
Cre04g0731 897 FunFam FERONIA receptor-like kinase 223 413 - -
Cre04g0731 897 FunFam FERONIA receptor-like kinase 39 198 - -
Cre04g0731 897 Pfam Protein tyrosine and serine/threonine kinase 545 807 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g0731 897 Gene3D Phosphorylase Kinase; domain 1 524 615 - -
Cre04g0731 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g0731 897 Gene3D - 39 198 - -
Cre04g0731 897 Gene3D - 224 413 - -
Cre04g0731 897 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Cre04g0731 897 CDD STKc_IRAK 545 811 - -
Cre04g0731 897 PANTHER OS03G0124300 PROTEIN-RELATED 16 477 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cre04g0731 897 FunFam Receptor-like protein kinase FERONIA 616 826 - -
Cre04g0731 897 MobiDBLite consensus disorder prediction 855 890 - -
Cre04g0731 897 SMART serkin_6 539 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g0731 897 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524(InterPro)
Cre04g0731 897 FunFam Receptor-like protein kinase FERONIA 511 615 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0731 Cre-Chr4:25517845 Cre07g1943 Cre-Chr7:34864894 2.30E-218 dispersed
Cre11g1171 Cre-Chr11:9526397 Cre04g0731 Cre-Chr4:25517845 9.30E-42 dispersed
Cre11g1565 Cre-Chr11:25312035 Cre04g0731 Cre-Chr4:25517845 1.60E-48 dispersed
Cre04g0723 Cre-Chr4:25370642 Cre04g0731 Cre-Chr4:25517845 5.90E-65 proximal
Cre02g1991 Cre-Chr2:33349055 Cre04g0731 Cre-Chr4:25517845 2.20E-239 transposed
Cre10g2391 Cre-Chr10:37940700 Cre04g0731 Cre-Chr4:25517845 1.70E-61 wgd
Cre03g0324 Cre-Chr3:1667531 Cre04g0731 Cre-Chr4:25517845 1.40E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64030 PF12819 Malectin_like 2.50E-40 CL0202 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0731 - - - 0.0