Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre04g0825 | ATGATTGTTTCCATGGACTTAAATGCCTCGCCGGTGCCTGAAGAGGATGAAGAGACGTTTGAGAGGCATGAAGAGGTGTATAGTGCTCCAGAGGAACATATAGAGACTGCTGTAAGCATAGCACGGCGGGAGCGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTCTCGAGAGACCGGTGCATGAATACCAGCAACCTGCACGGGATCAGTTTTACCCTTCTAAAAACCAAAAATCTGATAGAAACAGGCTTCCTCCAGGTTGGTTGGATTGCCCTGCATTTGGTCAAGAAATATGTTGCATGATTCCGTCCAAGGTTCCTCTGGGCGAATCCTTCAATGATTGTATAACACCTGGTAAAAGATACTCATTTAAGCAAGTGATCCATCAGCAGAGAGTTTGGGGAAGAAAACTCGGTTTGGTGATCGATTTGACAAATTCTTTTCGTTATTATACAACAGCAGATTTGAATAAGGAGGGTATCAAGTATGTTAAGATTCCTTGCAAGGGGAGGGATTCCGTACCTGACAACAAGTCAGTCAATATGTTTGTTTACGAGGTCATGCAGTTCCTATCTCGTCAGAAACACTCGAAGAAGTATATTCTTGTCCATTGTACGCATGGCCATAATCGCACTGGATATATGATCATAAATTATCTCGTGCGTGCACTGTCCATTTCTGTTACCCAGGCTCTTAAAATGTTTGCTGATGCACGCCCTCCTGGAATTTACAAGCCAGACTACGTTGATGCATTATATACCTTTTACCATGAAAGAAAACCTGAAGCAGTTGTTTGTCCATCCACGCCTGAGTGGAAGAGATCTTCAGATCTTGATCTTAATGGCGAAGCAGTTCCAGATGATGATGATGATGGAGGTCCTGCTGCTCCTTTGAATGAAAATCATGATGATGGTGCTCAAGTGATGACAAATGATGATATTTTGGGTGATGAGATACCTGAGGACCAAGAACGTGCTTTGAAACAATTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAATTTGCAATTTCCTGGGTCGCATCCAGTGTCTCTTAACAGAGACAATCTTCAACTGCTAAGGCAACGCTATTATTATGCCACATGGAAAGCTGATGGAACAAGATACATGATGCTAATTACCATGGATGGATGCTACTTGATTGACAGGGGTTTTAAATTTCGAAGAGTCCAAATGAGATTCCCATACAGAAATGCAAATGATGGCCAAGGTGAGAAGATTCACCACTATACACTACTTGATGGAGAAATGATTATTGATACTATGCCAGACTCGCAGAAGCAAGAGAGAAGATATCTTATATATGATATGATGACAATTAATCATGTTCCGGTCATTGAGCGTCCTTTCTATGAGCGGTGGAAGATGCTTGAAAAAGAAGTGATCGAACCTCGCAATTCTGAGCGCCAGAGTATTTACCAAAGCAGGAACCCTCATTATAGATATGACCTAGAGCCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCCACGGTTACCAAACTTTTGAAGGAGTTCATACCTAGGCTTTCACATGATGCTGATGGTCTGATATTTCAGGGGTGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCAGAAATGAACTCAGTCGACTTCCTATTCGAGTTGGGTGAAGATGATTCTGAGGTTCTTATTTTGTTTGAACGAGGAAAGAGGAAGACCATGGAAGGAAATAGGGTTAAGTTCAAAGATGGGGATCCCTCCTTTTATTCAGGAAAGATTGTCGAGTGCTCTTGGGATTCTGATGAGCAAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACTTATAAAAAGGTCATGCGGAGCATTAGAGACAATATCACGGAGGAGGATTTGTTGAAAGAGATTCATGAGATCATACGCTTGCCCATGTATGCAGATAGGATAAGGATTGATAGTAAAGCAGCTCAACATACGAATTCAACACGACGGAGGGTGACCAAGATGTCCGCCATTAGCTTCTTCTCCTTTGTGCTATCCTTTAGTGTGTGCAGAGCTGAATGGAAAGATGTTAAGTTCCAATCACATGCTTCATTTTGTTCGTTTCTGTGGCAAAACAAGCATGTTTATTTGCATTCTCATCCTCGAGATTACTTGGCTTATAACAAGAGAAGCGTTTTCTATGAGAATGGAGATGCAAGTTTCGGTCATATGGCTTGCGGAAAGACGCCACTGCAGTTGGATTACACGGATCCTTTTTGGGGGTTTTGGCAATTTGATGTTGTTGGCTTTGCGTTTCATCTTGCGGAGTCTCGTTTGAGGGTCTCCCAGGGCTTCGTTCCCTCAATTTCCATTGATCTTTGA | 2412 | 42.21 | MIVSMDLNASPVPEEDEETFERHEEVYSAPEEHIETAVSIARREREERKRRLKRDRSLERPVHEYQQPARDQFYPSKNQKSDRNRLPPGWLDCPAFGQEICCMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVWGRKLGLVIDLTNSFRYYTTADLNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVMQFLSRQKHSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKMFADARPPGIYKPDYVDALYTFYHERKPEAVVCPSTPEWKRSSDLDLNGEAVPDDDDDGGPAAPLNENHDDGAQVMTNDDILGDEIPEDQERALKQFCYQMLKLNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRGFKFRRVQMRFPYRNANDGQGEKIHHYTLLDGEMIIDTMPDSQKQERRYLIYDMMTINHVPVIERPFYERWKMLEKEVIEPRNSERQSIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFELGEDDSEVLILFERGKRKTMEGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRIDSKAAQHTNSTRRRVTKMSAISFFSFVLSFSVCRAEWKDVKFQSHASFCSFLWQNKHVYLHSHPRDYLAYNKRSVFYENGDASFGHMACGKTPLQLDYTDPFWGFWQFDVVGFAFHLAESRLRVSQGFVPSISIDL | 803 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26966267 | 26986104 | - | CrPI670011_04g008250.1 | Cre04g0825 | 495129 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre04g0825 | 803 | CDD | Adenylation_mRNA_capping | 324 | 552 | IPR001339 | GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro) | |
Cre04g0825 | 803 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 86 | 275 | IPR029021 | - | |
Cre04g0825 | 803 | Gene3D | DNA ligase/mRNA capping enzyme | 312 | 549 | - | - | |
Cre04g0825 | 803 | SUPERFAMILY | Nucleic acid-binding proteins | 554 | 665 | IPR012340 | - | |
Cre04g0825 | 803 | Pfam | mRNA capping enzyme, C-terminal domain | 581 | 649 | IPR013846 | - | |
Cre04g0825 | 803 | Gene3D | Protein tyrosine phosphatase superfamily | 82 | 294 | IPR029021 | - | |
Cre04g0825 | 803 | MobiDBLite | consensus disorder prediction | 22 | 66 | - | - | |
Cre04g0825 | 803 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 183 | 252 | IPR000387 | GO:0016311(InterPro) | |
Cre04g0825 | 803 | ProSiteProfiles | ATP-dependent DNA ligase family profile. | 435 | 580 | IPR012310 | GO:0003910(InterPro)|GO:0005524(InterPro)|GO:0006281(InterPro)|GO:0006310(InterPro) | |
Cre04g0825 | 803 | PANTHER | MRNA-CAPPING ENZYME | 78 | 654 | IPR051029 | GO:0004484(PANTHER)|GO:0006370(PANTHER) | |
Cre04g0825 | 803 | SMART | dsp_5 | 120 | 260 | IPR020422 | GO:0006470(InterPro) | |
Cre04g0825 | 803 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Cre04g0825 | 803 | CDD | RNA_5'-triphosphatase | 89 | 255 | - | - | |
Cre04g0825 | 803 | Pfam | mRNA capping enzyme, catalytic domain | 353 | 551 | IPR001339 | GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro) | |
Cre04g0825 | 803 | FunFam | mRNA capping enzyme, putative | 312 | 549 | - | - | |
Cre04g0825 | 803 | FunFam | mRNA capping enzyme family protein | 550 | 658 | - | - | |
Cre04g0825 | 803 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 205 | 215 | IPR016130 | GO:0016311(InterPro) | |
Cre04g0825 | 803 | Pfam | Dual specificity phosphatase, catalytic domain | 138 | 258 | IPR000340 | GO:0016311(InterPro) | |
Cre04g0825 | 803 | MobiDBLite | consensus disorder prediction | 275 | 309 | - | - | |
Cre04g0825 | 803 | FunFam | mRNA capping enzyme family protein | 82 | 296 | - | - | |
Cre04g0825 | 803 | Gene3D | - | 550 | 658 | IPR012340 | - | |
Cre04g0825 | 803 | SUPERFAMILY | DNA ligase/mRNA capping enzyme, catalytic domain | 313 | 552 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre04g0825 | K13917 | - | csv:101209960 | 1312.75 |