Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0847 ATGGGGGAATTAGATCAAGTGCAGGTATTTGGTGGATGGATGAGTCCCTTTAGCCGTAGAGTGGAGTTGGGTTTGAAACTCAAAGCCATAAAATATGAATACATTGAGGAAGACTTGAAGAATAAGAGCCATTTGCTTCTGAAATACAATCCAATTTACAAGAAGGTTCCTGTGTTCATTCACAATGGAAACCCAATTTCAGAGTCGATTATCATCCTTGAATACATTGATGAAGTCTGGAATTCAGTTTACCCTTTCTTCCCTCAAGATCTCTATCAAAGAGCTCAAGCAAGGTTTTGGGCTAAGTTTATCGATGACAAGGTTGTGGCTGCTATACTGAAAGCTGCTCGAAGCAAAGGAGAAGAGAAAGAGAAGGCTATAGAAGAAACAGAGAAAACATTAGAACCACTTGAGAAGGAGCTTGAAGGCAACAAGTTTTTTGGAGGAGAGAAAATTGGATTTGTGGACATTGTTGGGATTGTATTAGCCTATTGGGTTCCTGCCATTGAAGAAGCTTTTGGATTTCAGCTGTTGACAAGTAACAATAAGTTTCCAAATTTAAGCAAATGGAGTGAAGAGATTGTGAACCACAACCTGGTCAAGCAGTTTCCAGCGGCTTACGCGGTGGCTTACGGCACTCTTAGCCTCCGCCACAAGAAATTGAAACAAAGTCGGCGAGTGGAGTTAGCTCTCAAACTCAAAGGCGTCGAATATCAATACTTTGAGGAAGATTTATCCCACAACAAGAGCCATTTGCTGCTGAAATACAATCCAATTTACAAGAAAGTGCCTGTTCTACTCCACCATGGAAAACCCATTGCAGAGTCTCTTGTAATCCTTGAATACATTGATGAAATCTGGAAAGCCAATCCCATTTTACCCCAACATCCCCATCAAAGAGCTCTTGCCAGGTTCTGGGCTAAGTTTATCGATGACAAGGTTGTGTGTGCAGTAGTGAAGGCTGCTGGAAGCAAAGAAGAAGAGAGAAAGAAAGCTATAGGGGAAGCAAGGGAGGCATTGGAAGCACTTGAGAAAGAGCTTAAAAGCAACAACTTCTTTGGAGGAGAAGAAATTGGGTTTGTGGACATTGTTGGGACTGTGATAGCTGGTTGGGTTCCTGCCATTGAACAATGCTTTGGGTTTGAGCTGCTCACAACTAATAACTTCCCTAACCTAATCAAATGGAGTGAACAGCTTCTTAACCATGCTGTTGTAAACCAGATTCTGCCTCCAAAAAATGAGATCGTTTCCTTTATGCAAGCTAATTGGAAAGTTTGA 1278 41.63 MGELDQVQVFGGWMSPFSRRVELGLKLKAIKYEYIEEDLKNKSHLLLKYNPIYKKVPVFIHNGNPISESIIILEYIDEVWNSVYPFFPQDLYQRAQARFWAKFIDDKVVAAILKAARSKGEEKEKAIEETEKTLEPLEKELEGNKFFGGEKIGFVDIVGIVLAYWVPAIEEAFGFQLLTSNNKFPNLSKWSEEIVNHNLVKQFPAAYAVAYGTLSLRHKKLKQSRRVELALKLKGVEYQYFEEDLSHNKSHLLLKYNPIYKKVPVLLHHGKPIAESLVILEYIDEIWKANPILPQHPHQRALARFWAKFIDDKVVCAVVKAAGSKEEERKKAIGEAREALEALEKELKSNNFFGGEEIGFVDIVGTVIAGWVPAIEQCFGFELLTTNNFPNLIKWSEQLLNHAVVNQILPPKNEIVSFMQANWKV 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27177777 27181511 + CrPI670011_04g008470.1 Cre04g0847 495151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0847 425 CDD GST_C_Tau 92 202 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cre04g0847 425 CDD GST_C_Tau 297 421 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cre04g0847 425 Coils Coil 113 140 - -
Cre04g0847 425 CDD GST_N_Tau 7 80 - -
Cre04g0847 425 SUPERFAMILY Thioredoxin-like 224 314 IPR036249 -
Cre04g0847 425 Pfam Glutathione S-transferase, C-terminal domain 306 401 IPR004046 -
Cre04g0847 425 Pfam Glutathione S-transferase, C-terminal domain 101 197 IPR004046 -
Cre04g0847 425 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 296 425 IPR010987 -
Cre04g0847 425 Pfam Glutathione S-transferase, N-terminal domain 225 285 IPR004045 -
Cre04g0847 425 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Cre04g0847 425 SUPERFAMILY GST C-terminal domain-like 285 423 IPR036282 -
Cre04g0847 425 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Cre04g0847 425 SUPERFAMILY GST C-terminal domain-like 78 209 IPR036282 -
Cre04g0847 425 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 204 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cre04g0847 425 CDD GST_N_Tau 224 287 - -
Cre04g0847 425 Gene3D - 87 218 - -
Cre04g0847 425 Gene3D - 293 425 - -
Cre04g0847 425 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Cre04g0847 425 Gene3D Glutaredoxin 219 292 - -
Cre04g0847 425 FunFam Tau class glutathione S-transferase 293 425 - -
Cre04g0847 425 Gene3D Glutaredoxin 4 86 - -
Cre04g0847 425 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 211 291 IPR004045 -
Cre04g0847 425 SFLD Glutathione Transferase (cytosolic) 5 221 IPR040079 -
Cre04g0847 425 Coils Coil 326 346 - -
Cre04g0847 425 FunFam Tau class glutathione S-transferase 1 89 - -
Cre04g0847 425 SFLD Main (cytGST) 224 421 - -
Cre04g0847 425 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 223 IPR010987 -
Cre04g0847 425 SFLD Main.3: Omega- and Tau-like 224 421 IPR045073 -
Cre04g0847 425 SFLD Main.3: Omega- and Tau-like 5 221 IPR045073 -
Cre04g0847 425 FunFam Tau class glutathione S-transferase 87 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0847 Cre-Chr4:27177777 Cre04g0857 Cre-Chr4:27251497 4.20E-74 dispersed
Cre04g0847 Cre-Chr4:27177777 Cre04g0848 Cre-Chr4:27183715 6.00E-44 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0847 K00799 - csv:105435246 333.954