Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre04g0862 | ATGACGGAACAACTGCAGGTGCAGGTGTTTGGTTCTAGGTTTAGTCCCTTCAGTCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGGCATAAAATACCAATATGTGGAGGAAGACATACCCAACAAAAGCCATTTGCTTCGGAAATACAATCCACTTTACAAGAAGGTCCCTGTGCTCGTCCATAATGGAAACCCCATTGCTGAGTCTCTTGTCATCCTTGAATACATTGATGAGCATTGGAAAACCAACCCCATCTTGCCCCAGCATCCTCGGGAAAGAGCTCAAGCAAGATTTTTGGCCAAGTATATTGATGACAAGTTTTTTGGTGCGTGGAGGAAAGCTGTTAGAAGTCAAAGAGAAGGGAGAGAGAAGGTTGTGAAGGCTGTGGAGGAAGCATGCAAGGCGTTGGAAGCAGTTGAGAATGAGCTTAAAAGCAACAATAAGTTCTTTGGAGGAGACAACATTGGGTTAGTGGACATTGTAGGCATCTTCATAGGCTATTGGGTTCCTATCATGCAAACAGCTCTTGGGTTTGAGATTCTGAGCAGCCACAGGTTCCCAAAACTAAGTAAATGGAGTGAAGATCTTATGAGCCATAGCGTTGTGAAGGAGATTCTCCCTCCAAAACCTGACCTTTTTGCTTATACTCAAACTCGTTTTCTATCCAAAAATCTGGGTTCTAAGCTGTGA | 690 | 44.2 | MTEQLQVQVFGSRFSPFSRRVELALKLKGIKYQYVEEDIPNKSHLLRKYNPLYKKVPVLVHNGNPIAESLVILEYIDEHWKTNPILPQHPRERAQARFLAKYIDDKFFGAWRKAVRSQREGREKVVKAVEEACKALEAVENELKSNNKFFGGDNIGLVDIVGIFIGYWVPIMQTALGFEILSSHRFPKLSKWSEDLMSHSVVKEILPPKPDLFAYTQTRFLSKNLGSKL | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 27277182 | 27279133 | - | CrPI670011_04g008620.1 | Cre04g0862 | 495166 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre04g0862 | 229 | FunFam | Tau class glutathione S-transferase | 1 | 89 | - | - | |
Cre04g0862 | 229 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 78 | IPR004045 | - | |
Cre04g0862 | 229 | Gene3D | - | 86 | 224 | - | - | |
Cre04g0862 | 229 | CDD | GST_N_Tau | 7 | 80 | - | - | |
Cre04g0862 | 229 | SFLD | Main (cytGST) | 5 | 220 | - | - | |
Cre04g0862 | 229 | CDD | GST_C_Tau | 90 | 219 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Cre04g0862 | 229 | SUPERFAMILY | Thioredoxin-like | 7 | 108 | IPR036249 | - | |
Cre04g0862 | 229 | ProSiteProfiles | Glutaredoxin domain profile. | 1 | 93 | - | - | |
Cre04g0862 | 229 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 217 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Cre04g0862 | 229 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 220 | IPR010987 | - | |
Cre04g0862 | 229 | SUPERFAMILY | GST C-terminal domain-like | 78 | 219 | IPR036282 | - | |
Cre04g0862 | 229 | SFLD | Main.3: Omega- and Tau-like | 5 | 220 | IPR045073 | - | |
Cre04g0862 | 229 | Coils | Coil | 122 | 146 | - | - | |
Cre04g0862 | 229 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Cre04g0862 | 229 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 5 | 84 | IPR004045 | - | |
Cre04g0862 | 229 | Pfam | Glutathione S-transferase, C-terminal domain | 116 | 198 | IPR004046 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g0858 | Cre-Chr4:27255540 | Cre04g0862 | Cre-Chr4:27277182 | 9.40E-20 | dispersed | |
Cre04g0860 | Cre-Chr4:27261224 | Cre04g0862 | Cre-Chr4:27277182 | 1.50E-30 | dispersed | |
Cre04g0862 | Cre-Chr4:27277182 | Cre05g0336 | Cre-Chr5:3082789 | 9.60E-49 | dispersed | |
Cre04g0861 | Cre-Chr4:27270641 | Cre04g0862 | Cre-Chr4:27277182 | 7.60E-58 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre04g0862 | K00799 | - | csv:105435246 | 256.144 |