Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre04g0912 | ATGGGGGTGGGTAATGGGATGTCCATACAGATTGATCCGAGTGGGCAATGGGATGTTGATAAGGTTTGTCATGGTTCTTTAGAGGAAGAGGCGCATTTGATTCTATCAATACCAGTTAATGGGCTTAAAAGGGAGGATGATATTTTTGGGGGTTTTGATAAGAAGGGTATGTTTTTGGTGAAAAGTGCATACCAATTGGGGTCGAGGGACAAGGGATCTTTGTCTCTAATGAGGCTAGATGGCTGTTTGGAAAGGGATCTAGGGACTTCGATGGATCATGTGGGTTGGGTTTGTTTGAATGGTCGTGCGAGTGAGCTTGATTTGCTCCTTGTGGCTTTGCGGCGAATTTGGAGCTTGAGCAATCAGGTGGTGTTCCAAAGGGGTGGGATTTTGATCCCTTTTCTGGATGGGGTAGGAGCCTTGGGGTGGGTTTTGAGGGATCAAGCTGGGTGGCTTAGGCGCACTATCCTCTCTCACACTGAGAGACACAGAGTATTATGCAATGATCAATCAAATCAAACAGTACAGAAGATAAATTCTCTTTCTTTGAAGCCTTCCATTTTTTTTTTCTTTATTCATATGGGTAATCGTATTGGGAAGATTGGCCACTGTTTCGCCGGCGCCGGCGATATTTCCCGCCGTTATGATCCCGCCGACATTATCTCCGACCCACACGACGGGGGTTTCGGTCATTCCTTTTACTACCTCCCACCCGAACCACATACCCTCTCCTCCTCCAAAGATTTCTCCGACGACTACATCTCTCCGGCGACCATTTTCCGGTCGATTTCCGGCGCCTCTGTGAGTGCCAACGTCTCAACGCCGCTCTCCACTTCTCTTGTCGATCTCTATCCTTACAGCACCACGTTTGATCGGGCCGCAGCTTTCGATTGCTCGAATTCCTTCGCCTCCGTGCCGTTGCAGCCGGTGCCTCGCCAGTCGGTGTCGGGAAATTCCGGCGGATTCCCTTCTTCGGGTCCACTGGAGAGAGGGTTTTTATCTGGACCTTTGGCCGCCAGGACCTTCGAATCGGGTCCGATTGATCGAGTGGTTTATTCCGGTCCGATTGAGAAGGGTGGTGGACCCGAGAAATTGCAAAGGAACGTCTCTCATGGCGGCGTCGGAGACAGAGAACCGAAATCGAAAAGAAGAAGAAGAAGAAGAAGTCTTATTCGGATTCTGAAGAGAGCCATATCCAAAACCATTTCTCGAAACCAGAAGGCAGCGACTAAGAGAGTGAGAGAATCGGAATCGTACAAGCATAATGAAAATGCTGCAGCTTCTGCAGCTCAGACTCAGAGCAGTGTCCATTTGAGCAGCCATGCGAGCTTGGCTCAGGAAGACGACGGCGATTATTTTCTCGGCGGTCAGAGCGTGCAGTGGGCGCAGGGGAAAGCCGGTGAGGATAGAGTTCACGTGGTGATATCGGAGGATAATGGTTGGGTTTTCGTCGGAATTTATGATGGATTCAACGGTCCTGATGCTCCTGATTACTTACTTGCTAATCTCTACACTGCCGTTCTTAAAGAACTCAAGGGTTTGATTTGGAGTGATAAGTTTGATTCGACGGCAACTTCATCTTCCATGAACTCATCCAACTCTGCTTCAATTGAGGAAGACGATCATGGAACAACTCACATGAAAAATCAGGAGAATGATCATCAATCGACAGAGAACTTCTCAGCACAAAATGGGGTTGTGAATTTGGAGGCTGATTCAGTGAGGACAAGAGAGAGAGTTTATAATACGAACTATAGGACGAGTCAGCTGATGAAGAAGGCTGATCAGAATCCAAAGAATTGGAAATGTGAATGGGAAAGGGAAAGATTAGGATTAGAGGGGAAGTTGAACAATAGACAATTAGATCACCACCAAATATGGGATGAATCAACAGCCATCAATCATTCTGAGGTGTTGAATGCTCTGTCTCAAGCTTTGAGAAAAACAGAGGAAGCATATCTGCAGAATGCAGACAAGATGGTCACAAGAAATCCTGAGCTAGCTCTTATGGGTTCTTGTGTTTTGGTTATGTTGATGAGAGGAGAAGATGTCTACTTGATGAATGTAGGAGACAGCCGCGCAATTGTAGCACAGCAATTTGAACCGGATTTCGGGACTGGAAAGCCATACAGAGACTTAGAGAGAATCAACGAAGGAGCACTACGAGTATTTGAATCCTCTAATGGACTAGAGTTTGAAAGATTAAAAGCCTTGGCTTCCCATCAGCTTACGATGGACCATAGCACTTACACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCTGATGACGCTTCCGCAATTATGAATGACAGGGTGAAAGGTTATTTGAAGATCACGCGGGCGTTCGGAGCTGGCTTTCTGAAACAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATTCACCTTACATCACCTGTGATCCAACTCTGTGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATATTGTCCTCTGATGGACTCTACCAGTACATTACCAATGAAGAAGCTGTTGCTCAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGACCCTGCTCAAAATCTAATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCACGATGACGTTTCGGTTTTCTTTCTAAAATATTCTTGGAAATGGAAGTCTTGGCCAGATTGCAAAAGCATCCATCACAGGCTGAGTTGTTCATTTGGCAATGGAAAAGGTAGGGAGACAAAGGTAAGTGCCGCCCGCCAAATGCTGTGGAGAAGGAATAGATTGGTAGGCCAGAACATAATGAGATATAAACTTAATACACCCCTTCACTTTCTCCCCACCCCACCACACATTCCAATATTGGAGAAGGCTCCTGAGAAATTTGGAAGTTCTTGGTCAGTTTCAAGGCTATGGAATTCTACTGTTGAATTCAAAAGGCAATATATGATTGATTTCTATGATGTTGGAGACAGACTCGTCTCCCTTCAACAGGAGCAGAAAGGCAGGGAGAACATCAGATCTTGTATGAAGCTTGTCTATGATGGTGTCTGTTACTATCATAAATCCATGGAAAGGAGGACCAGCACATCTCTTTTGACTTTTGCCACCGATGGATATTGA | 3192 | 45.9 | MGVGNGMSIQIDPSGQWDVDKVCHGSLEEEAHLILSIPVNGLKREDDIFGGFDKKGMFLVKSAYQLGSRDKGSLSLMRLDGCLERDLGTSMDHVGWVCLNGRASELDLLLVALRRIWSLSNQVVFQRGGILIPFLDGVGALGWVLRDQAGWLRRTILSHTERHRVLCNDQSNQTVQKINSLSLKPSIFFFFIHMGNRIGKIGHCFAGAGDISRRYDPADIISDPHDGGFGHSFYYLPPEPHTLSSSKDFSDDYISPATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRQSVSGNSGGFPSSGPLERGFLSGPLAARTFESGPIDRVVYSGPIEKGGGPEKLQRNVSHGGVGDREPKSKRRRRRRSLIRILKRAISKTISRNQKAATKRVRESESYKHNENAAASAAQTQSSVHLSSHASLAQEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYTAVLKELKGLIWSDKFDSTATSSSMNSSNSASIEEDDHGTTHMKNQENDHQSTENFSAQNGVVNLEADSVRTRERVYNTNYRTSQLMKKADQNPKNWKCEWERERLGLEGKLNNRQLDHHQIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQFEPDFGTGKPYRDLERINEGALRVFESSNGLEFERLKALASHQLTMDHSTYTEEEVQRIKNAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYITNEEAVAQVESFIASFPEGDPAQNLIEEVLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVFFLKYSWKWKSWPDCKSIHHRLSCSFGNGKGRETKVSAARQMLWRRNRLVGQNIMRYKLNTPLHFLPTPPHIPILEKAPEKFGSSWSVSRLWNSTVEFKRQYMIDFYDVGDRLVSLQQEQKGRENIRSCMKLVYDGVCYYHKSMERRTSTSLLTFATDGY | 1063 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 27800486 | 27808847 | + | CrPI670011_04g009120.1 | Cre04g0912 | 495216 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre04g0912 | 1063 | Gene3D | - | 420 | 911 | IPR036457 | - | |
Cre04g0912 | 1063 | MobiDBLite | consensus disorder prediction | 402 | 441 | - | - | |
Cre04g0912 | 1063 | MobiDBLite | consensus disorder prediction | 554 | 568 | - | - | |
Cre04g0912 | 1063 | FunFam | Protein phosphatase 2C 29 | 605 | 915 | - | - | |
Cre04g0912 | 1063 | SMART | PP2C_4 | 442 | 906 | IPR001932 | - | |
Cre04g0912 | 1063 | PANTHER | PROTEIN PHOSPHATASE 2C | 431 | 906 | IPR015655 | GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro) | |
Cre04g0912 | 1063 | MobiDBLite | consensus disorder prediction | 539 | 553 | - | - | |
Cre04g0912 | 1063 | CDD | PP2Cc | 627 | 903 | IPR001932 | - | |
Cre04g0912 | 1063 | ProSiteProfiles | PPM-type phosphatase domain profile. | 453 | 908 | IPR001932 | - | |
Cre04g0912 | 1063 | MobiDBLite | consensus disorder prediction | 353 | 388 | - | - | |
Cre04g0912 | 1063 | SUPERFAMILY | PP2C-like | 464 | 905 | IPR036457 | - | |
Cre04g0912 | 1063 | MobiDBLite | consensus disorder prediction | 523 | 568 | - | - | |
Cre04g0912 | 1063 | MobiDBLite | consensus disorder prediction | 422 | 441 | - | - | |
Cre04g0912 | 1063 | Pfam | Protein phosphatase 2C | 618 | 878 | IPR001932 | - | |
Cre04g0912 | 1063 | MobiDBLite | consensus disorder prediction | 523 | 538 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g1185 | Cre-Chr1:24032225 | Cre04g0912 | Cre-Chr4:27800486 | 8.30E-15 | dispersed | |
Cre04g0912 | Cre-Chr4:27800486 | Cre10g0436 | Cre-Chr10:3246203 | 2.80E-119 | dispersed | |
Cre05g0741 | Cre-Chr5:6587051 | Cre04g0912 | Cre-Chr4:27800486 | 1.10E-63 | transposed | |
Cre02g2322 | Cre-Chr2:36713279 | Cre04g0912 | Cre-Chr4:27800486 | 1.10E-196 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre04g0912 | - | - | - | 0.0 |