Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0913 ATGGCGATCTCTGGCTTTCGAGCTCTTCTATGGTGGAGCAACAGATGGTCCAAGAAAGACTGGGCGATTGCAGCTATCTGTTTCGCTTTCATTGTTTTCGTTTTTTCCTTCCTCTCCGATTCTTGGCATGCTGAAGACAGTGGCATCAACCATAGTTTCGATCTCAATCCCGCCAATGACCCCGATTTGGTTGACCTATCTTTGCTTCAGAATGCCAAAGCAAAAGGCGCTCGATGTCTTGATGGGAGTTTGCCTGGATACCATTTTCAGAAAGGCTTTGGATCTGGTTCTACCAGCTGGGTTCTTCATATTGAGGGTGGAGGTTGGTGCGATACAGTCTCGTCTTGTTCTTCGCGGAAAATGACCCCGTTAGGTTCATCAGACTACATGGAGCGTCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAAATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAAGGTGAAACAAAGAATGGAGATGTACTTTATTTCAGAGGCCAGCTCATCTGGGAAGCACTTATGGATGAACTCTTATCTGTTGGCTTGTCAAAGGCTAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTACCGAAGTATGCAACTGTCAAGTGTCTGGCTGATGGTGGATTTTTCCTTGACGAGGAAGATGTTTGGGGAAATCGTACAATGAGATCTTTCTATCATGATGTTTTCAACCTTCAGAGAACTGGTAAAAGCTTACCCAAGGATTGTACAGCTACGGACGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATACACACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAACATGTCTTGGTGCCAAACACATTAGATCCTGCTGGCTCTTGGCAAAAATGTAGGCTTAATATTCATAAATGTGACCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGGGACTCTTTGCTGAAGGCGCTGAGTGACTTCAAGCACAACAAGGAAGGAGGACTTTTTGTAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCACAATTCTCCAAGGATAAATAAGAGCACTATAGCAGAGGCCGTGGGTGATTGGTACTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTTAGCCAAGCCGTTGATGTTATTAGATTCTTACGTGCTCCGAGTCAGCCATAA 1338 44.02 MAISGFRALLWWSNRWSKKDWAIAAICFAFIVFVFSFLSDSWHAEDSGINHSFDLNPANDPDLVDLSLLQNAKAKGARCLDGSLPGYHFQKGFGSGSTSWVLHIEGGGWCDTVSSCSSRKMTPLGSSDYMERRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEGETKNGDVLYFRGQLIWEALMDELLSVGLSKARQALLSGCSAGGLATLIHCDDFRELLPKYATVKCLADGGFFLDEEDVWGNRTMRSFYHDVFNLQRTGKSLPKDCTATDEPSKCLFPQEIIKHIHTPLFLVNPAYDFWQIQHVLVPNTLDPAGSWQKCRLNIHKCDHAQLEILQGFRDSLLKALSDFKHNKEGGLFVNSCFIHCQTWMSETWHSHNSPRINKSTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFSQAVDVIRFLRAPSQP 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27808992 27817099 - CrPI670011_04g009130.1 Cre04g0913 495217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0913 445 Pfam Pectinacetylesterase 61 410 IPR004963 GO:0016787(InterPro)
Cre04g0913 445 PANTHER NOTUM-RELATED 39 426 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g2058 Cre-Chr3:37631942 Cre04g0913 Cre-Chr4:27808992 3.30E-123 transposed
Cre07g1480 Cre-Chr7:30029550 Cre04g0913 Cre-Chr4:27808992 4.60E-110 transposed
Cre04g0913 Cre-Chr4:27808992 Cre05g1004 Cre-Chr5:9217181 7.50E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0913 K19882 - csv:101206380 816.609