Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g0981 ATGTCTCTTGGGAGCTCCAAATTTGTGTTTCTTCTATTATCCTTCCTTCTCCTTTCCAATTTTGGAAAAAGCCAACAACTTATTATGAATTACTACAACCAAACTTGCCCAAAAGCTGAAGATATAATCAAACAAGAAGTTTTTTCTTTATACAAAAAACATGGAAACTCAGCCATTTCATGGATTAGAAATCTCTTCCATGATTGCATGGTCAAGTCATGTGATGCATCTCTTTTATTAGAGATGAAAAAGGAAGAAGGTGTATCAGAAATGAAGTCTTCAAGAAGCTTTGGGATAAGAAATCTCAAATATGTTAATAAAATTAAACAAGTCCTTGAAAATGAATGCCCTAACACTGTTTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCTATTGTTTTGTTGGGGGGATTAGAGATGGAAATGAAAACAGGAAGAAGAGATAGCAAAGAAAGCTATGGAGAAATAGTGGAAGAAATGATTCCAAATCATAATGACTCTCTTTCATTGGTTCTTTCTCGCTTTCAAGATATTGGCATTGATCCTCAAGCTACTGTTGCTCTTTTAGGAGCTCACTCGGTGGGTCGAGTCCATTGTGTAAACATAGTGAACCGTCTCTACCCGACCGTGGACCCGACTTTGGATCCAGATCACGCAGAATATTTAAAAGAAAGGTGCCCAAACCCGAACCCGGATCCGAAGGCAGTCCAATACGCTAGAAATGATTTGGAAACTCCGATGGTGTTGGACAACAATTTCTACAAAAACGTATTGGGGCACAAGGCCCTTTTGTTAGTGGACCAGCAATTGGGCTCAAGCCCAATAACTCTTCCTTACGTCCAACAAATGACCTACAATAACACTTACTTTCTGGCCCAATTTGCTAGGGCTTTGCTCTTGCTGTCTGAGAACAACCCTCTCACTGATGAAGAAGGAGAGATTAGAAAGGATTGTCGACGTGTCAACAATTGA 978 39.57 MSLGSSKFVFLLLSFLLLSNFGKSQQLIMNYYNQTCPKAEDIIKQEVFSLYKKHGNSAISWIRNLFHDCMVKSCDASLLLEMKKEEGVSEMKSSRSFGIRNLKYVNKIKQVLENECPNTVSCADIMALAARDAIVLLGGLEMEMKTGRRDSKESYGEIVEEMIPNHNDSLSLVLSRFQDIGIDPQATVALLGAHSVGRVHCVNIVNRLYPTVDPTLDPDHAEYLKERCPNPNPDPKAVQYARNDLETPMVLDNNFYKNVLGHKALLLVDQQLGSSPITLPYVQQMTYNNTYFLAQFARALLLLSENNPLTDEEGEIRKDCRRVNN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28411569 28413533 - CrPI670011_04g009810.1 Cre04g0981 495285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g0981 325 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 FunFam Peroxidase 164 303 - -
Cre04g0981 325 PANTHER - 10 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 Gene3D Peroxidase, domain 2 164 303 - -
Cre04g0981 325 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 Gene3D - 30 324 - -
Cre04g0981 325 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre04g0981 325 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 Pfam Peroxidase 44 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g0981 325 FunFam Peroxidase 30 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0759 Cre-Chr3:6448144 Cre04g0981 Cre-Chr4:28411569 9.80E-103 dispersed
Cre04g0981 Cre-Chr4:28411569 Cre07g1238 Cre-Chr7:25883449 2.90E-51 dispersed
Cre10g2155 Cre-Chr10:36096963 Cre04g0981 Cre-Chr4:28411569 5.60E-119 wgd
Cre04g0981 Cre-Chr4:28411569 Cre05g0955 Cre-Chr5:8816769 3.70E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g0981 K00430 - csv:101221151 564.688