Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1033 ATGAGTGGCGCAAGATTCAGCATCAGAACTGGGCGAAGAAGACTGTCACCGATGACGAATTTCGCCTTCCAAGTTCTATTTGGCCGATGGTTCACCGTCTTCGCTTCTTTACTCATCATGTCCGTTTCCGGCGCCACCTACATGTTCGCACTCTACTCCGCTGACATCAAATCCTCCTTCAATTATGATCAGACCACTCTCAACCTCATCGGCTTCTTTAAGGATCTGGGTTCCAACGTCGGAGTCTTTTCCGGCCTCATCAATGAAATTACTCCGCCTTGGGTTGTCCTCTTCATCGGTGGGGTAATGAATTTCTTGGGCTATTTCTGGATTTGGCTTTCTGTCACTCACCGAATCCCCAAACCCAAACTGCCCGCAATGTGTTTGTTTATATGCCTAGGTGCCAATTCTCAGACCTTTGCTAATACAGGGGCTTTGATCCCTTCTGTAAGGAATTTCCCCCGGAATCGAGGTAATGTTTTGGGTTTATTAAAAGGGTTTGTTGGGTTAAGTGGGGCAATTTTGACTCAGATTTACCATGCTTTTTATGGGGATGATTCTAAGGATTTTATCTTGCTTATTGCTTGGTTGCCTACTGCTGTTTCTTTCCTGCTTCTTCGGATTGTTAGAGTAGTGGAAGTGAACCCAATATTTAAATCCAATGATCTAAAAAATTTCTATTCTATGCTCTACATTTCCCTTGGTCTTGCTGGCTTCCTCATGATTTTGATTATTGTTCAAAACGAGCTCATGTTTACTAGAATTCAGTATTTGGGTTGTGCGTTTGTTCTCCTAGCGTTTCTTTTTCTTCCACTTGTCGTTGTTATAAGAGAAGAATTCGCCATTAGGAAGAGGAAATTGCAAGGTGTGGATGTAACTTCTTGGCTTCCAGTTCCAACAGACCCATCTCCAGCTGAATTACCATTGCCTAGACCTTCAAGTGTGCCGACGACTGCCATAGCTTTAGCCAACCCAAGTTCTTGCTTTGAAAACGTGTTCAAACCGCCAGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTCAGTGTAGATATGTTGATTCTGTTTGTTGCTACAATTTGTGGGGCTGGTGGGACTTTGACTGCAATGGACAACTTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATACCATTTCTACTTTCACTTCTCTAGTGAGTATATGGGGCTTTCTCGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTGTGGATGAAGTATAACTTCTCTCGCCCTCTGTTCCTCACTCTTGTGCTTCTTCTCTCTTGCGTTGGTCATCTTCTAATTGCCTCTGGAATCCCAACCTCCCTTTATTTTGCTTCAGTTATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCCATTGTTTCTGAAGTATTTGGCTTGAAATACTATGCAACTTTATATAGCATAAGCGGCATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTAGCTGGCTATTTATATGACCAAGAGGCTAGAAAGCAAATGGCAGCCGTTGGTCGTAGAAGTGTAGCTGGTAGAGACTTAGATTGCAAGGGCGTCCATTGTTACAGATTAGCTTTTCTCATAATATCTGCTGCAACCGTGTTCGGTTGTGTTGTTTCATTCATTTTGGTCCTTCGAACTTGGAAATTCTATAAGGGTGATATCTATAAGAAGTTTAGAGAGGAAAGAAAGGAAGCAGAATGA 1740 42.87 MSGARFSIRTGRRRLSPMTNFAFQVLFGRWFTVFASLLIMSVSGATYMFALYSADIKSSFNYDQTTLNLIGFFKDLGSNVGVFSGLINEITPPWVVLFIGGVMNFLGYFWIWLSVTHRIPKPKLPAMCLFICLGANSQTFANTGALIPSVRNFPRNRGNVLGLLKGFVGLSGAILTQIYHAFYGDDSKDFILLIAWLPTAVSFLLLRIVRVVEVNPIFKSNDLKNFYSMLYISLGLAGFLMILIIVQNELMFTRIQYLGCAFVLLAFLFLPLVVVIREEFAIRKRKLQGVDVTSWLPVPTDPSPAELPLPRPSSVPTTAIALANPSSCFENVFKPPERGEDYTILQAIFSVDMLILFVATICGAGGTLTAMDNLGQIGSSLGYSTHTISTFTSLVSIWGFLGRAFSGYASEFLWMKYNFSRPLFLTLVLLLSCVGHLLIASGIPTSLYFASVIIGFCFGAQWPLIFAIVSEVFGLKYYATLYSISGIASPVGSYIFNVKVAGYLYDQEARKQMAAVGRRSVAGRDLDCKGVHCYRLAFLIISAATVFGCVVSFILVLRTWKFYKGDIYKKFREERKEAE 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28929595 28931334 - CrPI670011_04g010330.1 Cre04g1033 495337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1033 579 Pfam Major Facilitator Superfamily 357 557 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre04g1033 579 Gene3D MFS general substrate transporter like domains 330 562 IPR036259 -
Cre04g1033 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 572 - GO:0016020(PANTHER)
Cre04g1033 579 Pfam Nodulin-like 29 276 IPR010658 -
Cre04g1033 579 SUPERFAMILY MFS general substrate transporter 227 566 IPR036259 -
Cre04g1033 579 CDD MFS_Mch1p_like 28 549 - -
Cre04g1033 579 SUPERFAMILY MFS general substrate transporter 30 244 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1033 Cre-Chr4:28929595 Cre08g0732 Cre-Chr8:20379496 3.40E-183 dispersed
Cre10g2113 Cre-Chr10:35730619 Cre04g1033 Cre-Chr4:28929595 1.50E-207 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1033 - - - 0.0