Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1049 ATGGCTTCTACTCTCTGTTTTCCCTCAATCACTTTCCCCTCCTCTCCCTTCCACAAACGAATCCCTCTCAGACGAAGAACCCCATCTCCTTATCCCTCCATTAAATCCTCCATTGACGAAGGAGGAAATCCCTCAACGCCCGCAAAGCTTAAGAACTCCACAAGCACTGCAAAATCCGGCTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTAACTCGTTACATTACTCTAGGGCAGGGCGACGACTCCGGCATCCCCATTGCAACTGCCAAGCTCGATGACGTTTCTGATCTTCTCGGCGGTGCTCTTTTCCTTCCACTTTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTCGCTGCTGGCCCTAGAAATTTCGTCGTCGTTAGTGATCCTGCCATTGCTAAGCACGTTCTCAGGAACTATGGGACTTACGCTAAAGGCCTTGTTTCTGAGGTTTCCGAGTTCTTGTTTGGGTCAGGTTTCGCCATTGCAGAAGGCCCTCTCTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCGGTTATTGTTGATCGAGTATTTTGTAAATGTGCCACGAGATTGGTGGAGAAGCTGGAAAAGGATGCATTAAATAATAATTCGGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCTGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCATATTGGAAGATTAAGGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACGGTGATCAGGAGAACTGTTGAAGAACTCATTGCCAAGTGCAAAAAAATTGTTGAAAGTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGATGCTGATCCAAGCATCCTCCGATTTCTGCTGGCCAGTAGAGAAGAGGTCTCAAGTGTACAGTTGCGAGACGACCTATTGTCCATGTTGGTTGCTGGGCATGAAACTACTGGTTCTGTTCTGACTTGGACACTGTATCTTTTAAGTAAGCATTCCTCCTCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTGTTACAAGGAAGGCCTCCTTCTTATGAAGATACGAAGGAACTTAAATATTTGACACGTTGTATCCTTGAGTCAATGCGACTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTTGCTGACATACTCCCCGGAAATTACAAGGTTAACGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTCTGGGAACAAGCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGCCCTGTACCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGCGGTGGACCTCGAAAATGTGTCGGTGATCAATTTGCCTTGCTTGAAGCTATTGTTGCACTTGCCATATTTCTACAGCATATGAATTTCGAGCTGGTTCCAAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAACGGTTTGTACATGAAACTCAGCCAAAGGAAGCTGACCCAAGAGTTAGTTTCTCCTGCATCTTCAAGTGAGATGCAACTTAGTTTCAATGGAGATGAGTTGGTATGGTATCATGGGATGTGGGGAAAAGGAGATGCCAATGCCAAAAGCATATCCCTTGGAAGATGCTGA 1776 44.31 MASTLCFPSITFPSSPFHKRIPLRRRTPSPYPSIKSSIDEGGNPSTPAKLKNSTSTAKSGSWVSPDWLTSLTRYITLGQGDDSGIPIATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCATRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKKIVESEGERIDEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADILPGNYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTQELVSPASSSEMQLSFNGDELVWYHGMWGKGDANAKSISLGRC 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29135078 29141392 - CrPI670011_04g010490.1 Cre04g1049 495353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1049 591 SUPERFAMILY Cytochrome P450 100 545 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 486 495 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre04g1049 591 Gene3D Cytochrome P450 90 562 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 MobiDBLite consensus disorder prediction 30 58 - -
Cre04g1049 591 CDD CYP97 105 539 - -
Cre04g1049 591 Pfam Cytochrome P450 107 528 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS E-class P450 group I signature 483 493 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS E-class P450 group I signature 111 130 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS E-class P450 group I signature 493 516 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 MobiDBLite consensus disorder prediction 23 58 - -
Cre04g1049 591 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS P450 superfamily signature 493 504 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PRINTS P450 superfamily signature 484 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1049 591 PANTHER CYTOCHROME P450 FAMILY 4 102 543 IPR050196 GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1049 Cre-Chr4:29135078 Cre07g1460 Cre-Chr7:29703950 8.10E-108 dispersed
Cre10g0989 Cre-Chr10:14799156 Cre04g1049 Cre-Chr4:29135078 7.30E-131 transposed
Cre03g0614 Cre-Chr3:5062887 Cre04g1049 Cre-Chr4:29135078 3.60E-23 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1049 K09837 - csv:101204961 1035.4