Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1084 ATGAAGCTGCACGAGAATCTTTTTGTATTTGTATTGCTTCTTTGGCTTGTTGCCTCATTTATGATCCACGGTTCAAACCACCATGAAATTAGAAAGCCATACATCGTGTATATGGGAGACTTGCCCGGCGGATCTCCGTCGTCCACGGTGGCGGATGACCACCACAACCTGCTTTTGGACGCCATTGGAGATGAAAAGATAGCGAGAGAGTCCAAAATCTACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCAAGACTTTTGCCTCACGAAGTCACCAAGCTCTCAAATGAGGAGGGTGTGGTTTCGGTATTTCGGAGCAGAAAGCAAAGAGTTGTGACGACAAGATCCTGGGACTTTTTGGGATTAGATCATCATTATTCCAAACGTAACCCTAAAATTGAGTCTAATCTCATTGTCGCCGTTTTGGATACGGGGATTTGGATTGACAGTCCTAGTTTCAACGATGAAGGCTATGGCCCACCACCCTCTAAATGGAAGGGCAAATGCGTCACTGGCCCCAACTTCACAGCCTGCAACAACAAAGTAATCGGTGCGAATTACTTCGATCTGGAAAACGTAAGCCAATATCCAGAGTCGAGCGTGGCGGACACGGAGGGCCACGGCTCTCACACGGCGTCCACGGTGGCAGGTTCGGCCGTGGAGGGGGCGAGCTTGTACGGCCTGGCCAAAGGGACGGCGCGCGGCGGCGTGCCTTCAGCTCGAATTGCAGTCTACAAAGTGTGTTGGAGCATTTTCTGCAGCGAAATGGACGTTCTTGCTGGCTTCGATGAGGCAATCGCCGATGGCGTCGATTTGATTTCCGTCTCCATAGGGTCGCCGCCGATGGATTTCTTCAGGGACGGCCAAGCAATTGGGGCTTTTCATGCCATGAAGAAGGGAATTTTGACGTCCTGCGCCGCCGGCAATGACGGCCCTGAATTGTCCACCGTCGAGAATGTGGCGCCCTGGATTATGACCGTCGCTGCTACGGCCATTGATAGACGGTTCGTCACCGCTTTCAAACTCGGTAATGGCAACAAATTTACTGGACGTTCCATCAACACCTTCTCGCCAGAGAAAGAAATGTACTCTCTTACAAGCGGAGCCAAAGCGTCCAACAATGGCACACCCTATCAAGGAAATGCAAGTGCTTGTGATCCAGAAGCTATAAGCCAAAGCAAAGTGAAGGGAAAGATTGTATATTGCTTGAAAACTTACACAGACCCCTACATCAAATCCTTAGGAGGCACTGGAGTCATTCAACTCACTCGACAACAAGCTGATTATTCCTCCATTTTGCTTCTTCCTGGGGTTACCATCCCCTCACTCTCTGGCAAATACATTGATCTTTATATCAACTCCACCAAGAATCCTAAAGCTGTCATTTATAAGAGTAAAACTGTCAGAATTGATGCTCCCTTTGTTGCTTCTTTCTCATCTAGAGGGCCTCAGTTTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGACATCTTGGCTGCTTATACAAAACTAGCAAGTTTGACAGGGGATATGTCAGACAGTAGATATAGTTTATTCACTGTAATGTCAGGTACATCCATGGCCTGTCCTCATGCCACGGCGGCGGCTGCATATGTTAAGTCATTCCACCCCGACTGGTCTCCGGCTGCGGTCAAGTCTGCTCTCATGACCACTGCAACTCCAATGAAGATCATATCCAAGGACGCTGTACTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCAGTGCATCCCGGCCTTATTTACAACATTTCGTTCAACTCCTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATCGGCCTACTTGATGGTAACAAGAAGCATAACTGCTCCAAGATCAAGCCTGCACAAGGAACCGATGGTCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTAGTTCAGCCATCAAGGCGGTCTTTTATCGAACAGTGACTCATGTCGGGTATGGTCCATCGTTGTACAGGGCAAATATATCATCTCCAGATGGCCTATCTGTCAAAGTTTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACGAAAACATTTAAAGTTGTGGTGAAGGGAAAACCTATGCCAGAAGGAATATGGATTCGATCAGCTTTACTTGAATGGAACGACTCTAAACACATAGTTAGAAGCAATATCCTTATCTACAGGAAATTGATCTAA 2235 47.29 MKLHENLFVFVLLLWLVASFMIHGSNHHEIRKPYIVYMGDLPGGSPSSTVADDHHNLLLDAIGDEKIARESKIYSYGKSFNGFAARLLPHEVTKLSNEEGVVSVFRSRKQRVVTTRSWDFLGLDHHYSKRNPKIESNLIVAVLDTGIWIDSPSFNDEGYGPPPSKWKGKCVTGPNFTACNNKVIGANYFDLENVSQYPESSVADTEGHGSHTASTVAGSAVEGASLYGLAKGTARGGVPSARIAVYKVCWSIFCSEMDVLAGFDEAIADGVDLISVSIGSPPMDFFRDGQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGNKFTGRSINTFSPEKEMYSLTSGAKASNNGTPYQGNASACDPEAISQSKVKGKIVYCLKTYTDPYIKSLGGTGVIQLTRQQADYSSILLLPGVTIPSLSGKYIDLYINSTKNPKAVIYKSKTVRIDAPFVASFSSRGPQFISSNILKPDLSAPGIDILAAYTKLASLTGDMSDSRYSLFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIISKDAVLGSGAGQINPTKAVHPGLIYNISFNSYISFLCKEGYNSTTIGLLDGNKKHNCSKIKPAQGTDGLNYPTMHKQLSDPSSAIKAVFYRTVTHVGYGPSLYRANISSPDGLSVKVFPDTLNFVKLHETKTFKVVVKGKPMPEGIWIRSALLEWNDSKHIVRSNILIYRKLI 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29537450 29541814 - CrPI670011_04g010840.1 Cre04g1084 495388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1084 744 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 140 150 IPR023827 -
Cre04g1084 744 Gene3D Peptidase S8/S53 domain 138 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g1084 744 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Cre04g1084 744 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cre04g1084 744 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Cre04g1084 744 ProSiteProfiles Serine proteases, subtilase domain profile. 117 590 - -
Cre04g1084 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Cre04g1084 744 SUPERFAMILY Subtilisin-like 5 617 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre04g1084 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 736 IPR045051 -
Cre04g1084 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Cre04g1084 744 Pfam Subtilase family 136 571 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre04g1084 744 Gene3D - 334 469 - -
Cre04g1084 744 Gene3D - 607 742 - -
Cre04g1084 744 CDD Peptidases_S8_3 114 566 IPR034197 -
Cre04g1084 744 CDD PA_subtilisin_like 341 463 - -
Cre04g1084 744 Pfam Fibronectin type-III domain 640 739 IPR041469 -
Cre04g1084 744 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1084 Cre-Chr4:29537450 Cre07g1029 Cre-Chr7:13956529 2.30E-192 dispersed
Cre10g2028 Cre-Chr10:34920218 Cre04g1084 Cre-Chr4:29537450 6.60E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1084 - - - 0.0