Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre04g1232 | ATGGCTTCCAATGATTTTTCAGCCATTCTTTTTGCTTTGATAATTCCCTTTCTTTTCATCATTTTCTCTCGTGTTTGGAGGTGGAATTTCCATGGAGTCGTTCCTTGGAACTGGCCAATCCTGGGTATGACGCCCACTGTTGTTGCTCATATCCATCGACCTCATGATCGTATTACTGAAGTCTTACAAGAAGTTGGTTCCACTTTCTTCTTCAAAGGCATTTGGTTTTCAGGTATGGACTTCCTTTTCACAGTTGACCCTTCAAATATCCACCATATTTTGAGTGCCAATTTCGACCGATATCCAAAAGGCCCTGATTTCAAGTACATTTTTGATATTTTGGGAGATGGGATTTTCAACTCTGATTCAGATGTTTGGAAGAATCAACGTAAAACTGCTCATTCTTTGGTACACCATGAGAATTTTCTTCAATTCTTGGAGAAAATTACATTGAAGAAAGTGAAGGAAGGGCTGGTTCCGGTGCTTGAAAGTGTTTGTGAAAATGGGTCGGTGTTGGATTTGCAAGATTTGTTTCAGAGATTCTCCTTTGATTCAACTTGTATGTTGGTCACTGGCTTCGACCTCCATAGTTTATCTCTTGAATTCCCCCAAGTTCCTTTCTCCAAAGCCATGGATGATGCAGAGGAAGTGATTTTTCTTCGACATATTTTCCCTAAAAGAATATGGGAATTTCAGAAGAAACTCCAAATTGGACAACCCAAGAGGCTGAAACAAGCTTGGGAAATCATAGATGAAACCATCGCCAATTTGATAGCCTCCAAAAGGGAAAGCTTGAGAAATCAGGTGAAAGAAGAGGGAGATCAGCAAGGAGGAGGAGTTGATTTGATCACATCATATATTACAAATACAAACAAAAATGATAAATTTTTGAGAGATACAATCTTAAATTTTATGATTGCTGGTAGAGACACTCTGAGTTCTGCTCTCTCCTGGTTTTTCTTTTGTCTTTCAAACAATCCAAACATCGTAGCGAAGATTAGAGAAGAGTTCAAAACAACGATTCCAACGAATGAAGCTCGAGATCAATGGCGGATATTTTCGATTGAAGAGGTGGATAAGTTAGTTTACTTCCATGGAACTTTGTGTGAAGCTCTTAGACTATATCCTCCGGTCCCACTACAACACAAGGTGTCAGTACAACATGATATCCTCCCAAGTGGTCATCACATAAATCCCAAAACAAAGATTTTGTTTTCTTTATATGCATTGGGAAGAATGAGTGATGTGTGGGGGAAAGATTGTATGAAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAGGAATCAAACATGTGCCATCTTACAAATTTTTGGCCTTCAATGCTGGGCCAAGAACTTGCTTGGGAAAACAAGTAGCTTTCGTTGAGTTGAAAATAGTTGCAGCTGCCATTATTCACAACTATGATATTATTCAACAAATAGGGCATGAGGTTGTTCCAAATGCTTCCATTATTCTTCATATGAAGCATGGATTCAAGGTTAGGGTTACAAAGAGGTGGACTTGA | 1527 | 39.03 | MASNDFSAILFALIIPFLFIIFSRVWRWNFHGVVPWNWPILGMTPTVVAHIHRPHDRITEVLQEVGSTFFFKGIWFSGMDFLFTVDPSNIHHILSANFDRYPKGPDFKYIFDILGDGIFNSDSDVWKNQRKTAHSLVHHENFLQFLEKITLKKVKEGLVPVLESVCENGSVLDLQDLFQRFSFDSTCMLVTGFDLHSLSLEFPQVPFSKAMDDAEEVIFLRHIFPKRIWEFQKKLQIGQPKRLKQAWEIIDETIANLIASKRESLRNQVKEEGDQQGGGVDLITSYITNTNKNDKFLRDTILNFMIAGRDTLSSALSWFFFCLSNNPNIVAKIREEFKTTIPTNEARDQWRIFSIEEVDKLVYFHGTLCEALRLYPPVPLQHKVSVQHDILPSGHHINPKTKILFSLYALGRMSDVWGKDCMKFKPERWISEKGGIKHVPSYKFLAFNAGPRTCLGKQVAFVELKIVAAAIIHNYDIIQQIGHEVVPNASIILHMKHGFKVRVTKRWT | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 31045615 | 31047141 | + | CrPI670011_04g012320.1 | Cre04g1232 | 495536 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre04g1232 | 508 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | P450 superfamily signature | 454 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre04g1232 | 508 | Gene3D | Cytochrome P450 | 33 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PANTHER | CYTOCHROME P450 | 20 | 499 | - | - | |
| Cre04g1232 | 508 | SUPERFAMILY | Cytochrome P450 | 35 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | E-class P450 group IV signature | 361 | 377 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | E-class P450 group IV signature | 298 | 324 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | E-class P450 group IV signature | 438 | 454 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | E-class P450 group IV signature | 454 | 472 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | PRINTS | E-class P450 group IV signature | 412 | 430 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | Pfam | Cytochrome P450 | 36 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1232 | 508 | CDD | CYP86A | 69 | 499 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre04g1230 | Cre-Chr4:31014380 | Cre04g1232 | Cre-Chr4:31045615 | 6.30E-181 | dispersed | |
| Cre04g1232 | Cre-Chr4:31045615 | Cre04g1235 | Cre-Chr4:31084208 | 7.40E-251 | dispersed | |
| Cre04g1231 | Cre-Chr4:31027820 | Cre04g1232 | Cre-Chr4:31045615 | 1.60E-250 | tandem | |
| Cre04g1232 | Cre-Chr4:31045615 | Cre04g1233 | Cre-Chr4:31060771 | 1.30E-276 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre04g1232 | - | - | - | 0.0 |