Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre04g1235 | ATGGCTTCCATCAGCTTTTTAGAAATCCTTCTCGCTTTCATACCCTTTCTTTTGGTGCTTTTCCTTCTTTCTCTCAAGTGGAATTTCAATGGGCTTCCTTGGAATTGGCCTGTCTTCGGAATGACTCTCACTATTCTCTCCCATTTTCACCGAATTCATGATCATCTCACTCAAATCTTATACCAATCTTCTTCCACTTTCCTTTTCAAAGGTGTTTGGTTTGCTGATCTTGATTTCTTCTTTACAGCCAACCCTTCTAATATTCACCATATTTTGAGCACCAACTTTGAGCGATATCCCAAAGGCCCTGATTTCAAGTACATCTTTGAAGTTTTAGGAGATGGGATTTTCAACTCTGATTCAGATGCTTGGAAGAATCAACGCAAAACAGCTCATTCCTTGGTTCGGGATGAGAGTTTTCTTCAATTCTTGGAGAAAATTACATTGAAGAAAGTGAAGGAAGGGCTTGTTCCTGTGCTTGAAAGTGTTTGTGAAAATGAGTTGGTATTGGATTTGCAAGATGTGTTTCAGAGGTTCTCCTTTGATTCAACTTGTATGTTGGTCACTGGTTTTGACCTCCATAGTTTGTCTCTTGAATTCCCTCAAGTTCCTTTCTCCAAAGCCATAGATGATGCAGAGGAAGTGATTTTTCTCCGACATTTTTTCCCTAAAAAGATATGGGAATTTCAAAAGAAACTCCAAATTGGACAACCCAAGAGGCTAAAACAAGCTTGGGAAATCATAGATGAAACCATCGCTAAATTGATAGCCTCCAAAAGGGAAAGCTTGCGAAATCAGGTGAAAGAAGAGGGAGATGATCAGCAAGGAGGAGGAGTTGATTTGATTACATCATATATTACAAATACAAACAAAGATGATAAGTTTTTTAGAGACATCGTTTTAAATTTCATGATTGCAGGTAGAGACACTCTAAGTTCGGCTCTCTCTTGGTTTTTCTTTTGTCTTTCGAACAATCCAATTGTTGAAGAAAAGATAAGAGAAGAGCTCGAATCAACGATTCCATTAGATGAATCTCATGGTCAATGGCGGATATTTTCTATTGAAGAGTTGAAGAAGCTAGTTTACTTTCATGGGGCTTTATGTGAAGCACTTAGACTTTATCCTCCAGTTCCATATCAACACAAGGTCGCTATGCAACATGATACTCTCCCAAGTGGTCATCATATAAATCCTAAAACAAAGATTGTGTTTTCTTTATATGCATTGGGAAGAATGAGTGATGTGTGGGGGAAAGATTGCATGGAATTTAAGCCAGAGAGATGGATTTCAGAGAAGGGAAGTATTAAACATGTGCCATCTTACAAATTCTTGGCCTTCAATGCTGGACCAAGAACTTGTTTGGGAAAGGAAGTGGCTTTTACTGAGATGAAATTGGTTGCAGCTACCATTATCCATAACTACAATATTACTCGACAAATAGCGCATAAGGTTGTTCCAAATCCTTCTATTATCCTGCATATGAAATATGGATTCAAGGTCAGGATTACAAAGAGATGGTGTTGA | 1524 | 38.19 | MASISFLEILLAFIPFLLVLFLLSLKWNFNGLPWNWPVFGMTLTILSHFHRIHDHLTQILYQSSSTFLFKGVWFADLDFFFTANPSNIHHILSTNFERYPKGPDFKYIFEVLGDGIFNSDSDAWKNQRKTAHSLVRDESFLQFLEKITLKKVKEGLVPVLESVCENELVLDLQDVFQRFSFDSTCMLVTGFDLHSLSLEFPQVPFSKAIDDAEEVIFLRHFFPKKIWEFQKKLQIGQPKRLKQAWEIIDETIAKLIASKRESLRNQVKEEGDDQQGGGVDLITSYITNTNKDDKFFRDIVLNFMIAGRDTLSSALSWFFFCLSNNPIVEEKIREELESTIPLDESHGQWRIFSIEELKKLVYFHGALCEALRLYPPVPYQHKVAMQHDTLPSGHHINPKTKIVFSLYALGRMSDVWGKDCMEFKPERWISEKGSIKHVPSYKFLAFNAGPRTCLGKEVAFTEMKLVAATIIHNYNITRQIAHKVVPNPSIILHMKYGFKVRITKRWC | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 31084208 | 31085731 | + | CrPI670011_04g012350.1 | Cre04g1235 | 495539 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre04g1235 | 507 | CDD | CYP86A | 67 | 498 | - | - | |
| Cre04g1235 | 507 | PRINTS | E-class P450 group I signature | 443 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | PRINTS | E-class P450 group I signature | 453 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | SUPERFAMILY | Cytochrome P450 | 33 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | Pfam | Cytochrome P450 | 33 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | PANTHER | CYTOCHROME P450 | 20 | 498 | - | - | |
| Cre04g1235 | 507 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | PRINTS | P450 superfamily signature | 453 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | PRINTS | P450 superfamily signature | 444 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | Gene3D | Cytochrome P450 | 25 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1235 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre04g1232 | Cre-Chr4:31045615 | Cre04g1235 | Cre-Chr4:31084208 | 7.40E-251 | dispersed | |
| Cre04g1233 | Cre-Chr4:31060771 | Cre04g1235 | Cre-Chr4:31084208 | 1.20E-245 | dispersed | |
| Cre04g1235 | Cre-Chr4:31084208 | Cre09g0432 | Cre-Chr9:4158133 | 2.40E-100 | dispersed | |
| Cre04g1234 | Cre-Chr4:31069682 | Cre04g1235 | Cre-Chr4:31084208 | 1.20E-219 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre04g1235 | - | - | - | 0.0 |