Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1265 ATGACTTTGCATCGAAACTTTTTGATCGTTGTAATCGCTATTTTCTCGGCTTCTTTAACAATCGCCGAGGAGTTAAGGTCCTGCGAAACCGGAAATTGGGCTGAATCTGTACGCTATCCGTTTGGATTCTCAAACTCGAGCCTAATCAAATTGAATTGCAGCAAAAATGGCGAGATTCAAATCGGCAGATTCCAGGTCCAGAACATTACTGAAAGGAGCATCCTCATCAAACTTCCTACAGAGTGCAATATCTCTATCAATTCAATTTCAGAATTGTCCAGCCCAAACTACAAGCCCACTCTCCGCAACAGTCTCCTGTTGAATTGTACCGAACAACCACTGCCATGCGGAGTAATGGCCAATTTGAGCCTGAATCAGCCAACGGACTGCGGCTTTAAGAGTAACAATCTCAGCTGCTTCACCAGGACCGAGCAAAATGGATTTCTGCCTCCTTTAAATAAGTGCCACTCCCTTCTGTCCTCCGTATTCGTTAATTTTACGTCAAAATCAACCTCTTCGTTCGAGGTCGAGTTTGGGGTCATTGAGTTAGAGTGGTGGCTCTCACCTTTGCATTCCGTACGATGCTCAAAAAATGCCAATCGCGCGAACATTACCAGCTTGACGGAGAACCTAGGATTTCGTTGCCAGTGCATAGAAGGGTTTGAAGGAAATGCTTATGGCGACGTCGGCGGCGGCTGCCGGAAAGTTTCTCACAAGTGCAATACTTCAACATACATTACTGGCCGATGTGGCGGAAGCAAAGTTGCTGCTCTAATTGCAGGTGTCGTTGTTGGGGCTTTTCTAATGGCTGTCCTGACCCTTATCTGTTACTGCATCCGACGCCGCTCAATGTGTCTGAAAGGTCAGATGAGTGCAAAGCGGCTTCTAAGTGAGGCTGCCGGAAATTCCAGTGTTACTTTATATCCCTACAAAGAAATAGAAAGAGCCACTAATGGCTTCTCTGAGAAACAAAGGCTGGGAACTGGAGCCTTCGGTACAGTCTATGCCGGAAGGCTTCACGAGGACGAGTGGGTTGCTGTAAAAAAGATCAAATATAGAGACCACAATAGCATTGACCAGGTTATGAATGAGATAAAACTGCTTTCCTCGGTGAGCCACCCAAATCTGGTCCGCTTGCTTGGCTGCTGCATTGAGGAAGGCCAACAGATCCTTGTCTATGAGTTTATGCCCAATGGAACTCTCTCTCAGCATCTTCAGAGAGAGCGTGGAAATGGACTCCCATGGACGACACGTCTCACCATTGCAGCCGAAACTTCTCGTGCAATAGCATACCTCCATTCTTCTGTGCATCCACCAATATATCATAGAGACATCAAATCGAGCAATATACTTCTGGATCATGGTTTCAAATCAAAAGTTGCAGATTTTGGTCTTTCACGACTTGGTATGACAGAAATATCACACGTCTCAACAGCTCCACAAGGCACCCCTGGTTATGTTGATCCACAATACCATCAAAATTTTTATCTTTCAGATAAAAGTGATGTATATAGTTTTGGAGTAGTCCTCGTAGAGATAATAACAGCATTGAAAGTGGTTGATTTCACTCGTCCCCAGAGTGAAGTGAACTTAGCTGCACTTGCCATTGATAGGATTGGGAGAAATTCTGTGGATGAATTAATTGATCCTTTCCTCGAGCCACATAGAGATGCTTGGACCCTATACTCTATTCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCTTTCCACAGTGACATGAGGCCTTCGATGACAGAAGTAGCAGAGGAATTGGAAAACATCAGACGCAGCGGGTGGACATCAATGGAGGAGCATTTTTGTGCAGCATCATCAGCAGGGTCGGCTTGCTCATCTCCTCGTAGTCTAAGCGAGAGATCCATAAGTAGCATTACAATTAAGAAGGCCGGGTTGCTTGCAGGACTGGGGAGCCAGAGATTGATAATCCCACCGGATAACAACCATACGAAGGACTATCTGCCTCCTGTTGAGGAGGTTATGGATAGTTCCCCAGTTTCAATACAGGATCCTTGGTTAAGTGAACAAAGCTCACCTTCAACAAATAGTTTATTGGGTAATGTAGCACGGTGA 2091 45.48 MTLHRNFLIVVIAIFSASLTIAEELRSCETGNWAESVRYPFGFSNSSLIKLNCSKNGEIQIGRFQVQNITERSILIKLPTECNISINSISELSSPNYKPTLRNSLLLNCTEQPLPCGVMANLSLNQPTDCGFKSNNLSCFTRTEQNGFLPPLNKCHSLLSSVFVNFTSKSTSSFEVEFGVIELEWWLSPLHSVRCSKNANRANITSLTENLGFRCQCIEGFEGNAYGDVGGGCRKVSHKCNTSTYITGRCGGSKVAALIAGVVVGAFLMAVLTLICYCIRRRSMCLKGQMSAKRLLSEAAGNSSVTLYPYKEIERATNGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKKIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQRERGNGLPWTTRLTIAAETSRAIAYLHSSVHPPIYHRDIKSSNILLDHGFKSKVADFGLSRLGMTEISHVSTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITALKVVDFTRPQSEVNLAALAIDRIGRNSVDELIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMTEVAEELENIRRSGWTSMEEHFCAASSAGSACSSPRSLSERSISSITIKKAGLLAGLGSQRLIIPPDNNHTKDYLPPVEEVMDSSPVSIQDPWLSEQSSPSTNSLLGNVAR 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31379013 31382531 - CrPI670011_04g012650.1 Cre04g1265 495569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1265 696 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g1265 696 FunFam Wall-associated receptor kinase-like 14 287 395 - -
Cre04g1265 696 MobiDBLite consensus disorder prediction 671 696 - -
Cre04g1265 696 Pfam Protein tyrosine and serine/threonine kinase 323 592 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1265 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre04g1265 696 ProSitePatterns Protein kinases ATP-binding region signature. 326 349 IPR017441 GO:0005524(InterPro)
Cre04g1265 696 FunFam Wall-associated receptor kinase-like 20 396 605 - -
Cre04g1265 696 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 682 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cre04g1265 696 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Cre04g1265 696 SMART serkin_6 320 601 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre04g1265 696 MobiDBLite consensus disorder prediction 673 696 - -
Cre04g1265 696 Gene3D Phosphorylase Kinase; domain 1 282 395 - -
Cre04g1265 696 Gene3D Transferase(Phosphotransferase) domain 1 396 612 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g1265 Cre-Chr4:31379013 Cre07g1836 Cre-Chr7:33743065 1.30E-77 dispersed
Cre04g1265 Cre-Chr4:31379013 Cre08g1487 Cre-Chr8:27685260 5.00E-165 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64054 PF07714 PK_Tyr_Ser-Thr 4.70E-45 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1265 - - - 0.0