Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1278 ATGGGCAGGCCAAAGAAGGTTTCAAAGCCGACACCTTTTCAGTGGCTGCTGTACTTAATTAAACAGCATATCTTACTGGTGGCGGCACTAAGGTTTCTGAGTAGCCATGGCCGATTTCCAGACCTCGACTCAACGGGCCAAATGGATCTTGTCTCCTCAGGAGCTGGTTCAGGAGCATATTTTGTTTATATAGATTGCTTTAACAAGCAACTGGAGTTTCTTACTTCTATGGACGATCATTTCGATTCACATGTTCTACAGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCGATCGAAGCTCTGGAGAAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATAAATTCAAAAGATAATACTGACAAACACTCTCGCTCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAACTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAGCATAATCCAAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCACGTCTCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTAAATGATATCGAGGAACTCTTCAATGAGAATGTTGAAATGCTTCAAATGCTAAAGGTAATTGCCCCATTGTTCAATGTAATTGATACTGTAGTATGGGAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTAGCACTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGATAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTACGAGCGTATAAATTCAATTGAATCATTGGTTAATAGATATACATTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAACTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGATCATGTTTTCCTGGGCTTTTACTGGTTTTCAATGGTGAATACTGATGCGATTTACTATGTTTATCAGTTGTGTTTAAAGAGCATTGGTAGGCAGTGTTTAGCCACCCTTGCTTCTGCTGACAGTATTTTCTTTCATTCAGGTAGCTCAGCCTTGGCGTTGGGTAATGAGTTTGTCAGCAATATTTCTGGTCACTGA 1356 40.04 MGRPKKVSKPTPFQWLLYLIKQHILLVAALRFLSSHGRFPDLDSTGQMDLVSSGAGSGAYFVYIDCFNKQLEFLTSMDDHFDSHVLQVYRYKAANQRAIEALEKFGATLMEVDADGSLSYPDPQINSKDNTDKHSRSKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFNENVEMLQMLKVIAPLFNVIDTVVWETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHTISELYERINSIESLVNRYTFPSEKDLKHINRKLKSCWGLGSNDDHVFLGFYWFSMVNTDAIYYVYQLCLKSIGRQCLATLASADSIFFHSGSSALALGNEFVSNISGH 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31543972 31559558 + CrPI670011_04g012780.1 Cre04g1278 495582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1278 451 Pfam Cyclin, N-terminal domain 142 241 IPR006671 -
Cre04g1278 451 CDD CYCLIN_AcCycH_rpt1 90 241 - -
Cre04g1278 451 SMART cyclin_7 154 235 IPR013763 -
Cre04g1278 451 SUPERFAMILY Cyclin-like 134 243 IPR036915 -
Cre04g1278 451 Pfam Cyclin C-terminal domain 246 358 IPR031658 -
Cre04g1278 451 Gene3D - 130 242 - -
Cre04g1278 451 CDD CYCLIN_AcCycH_rpt2 244 379 - -
Cre04g1278 451 FunFam cyclin-H1-1 130 242 - -
Cre04g1278 451 Gene3D - 244 360 - -
Cre04g1278 451 PANTHER CYCLIN 128 380 IPR043198 GO:0000079(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)|GO:0006357(InterPro)|GO:0016538(PANTHER)|GO:0016538(InterPro)|GO:0070816(PANTHER)|GO:0070985(PANTHER)
Cre04g1278 451 SUPERFAMILY Cyclin-like 246 381 IPR036915 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1278 K06634 - csv:101220754 539.265