Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre04g1338 | ATGGAAAATTACTCTTTGCTTTGCCTTTTTCTCTCTCTTATCTCTCTCCTCTTCGCTTTCAATCTCCGCCGTCGCAGAAACTTACCGCCCAGTCCGCTGTCACTTCCCATCATCGGCCACCTCCATTACCTCAAAATCCCCGTCCACCGAACTTTCCAGAACCTCTCTGCAAAATACGGACCAGTAATCTCTCTTTGGTTCGGATCTCGCCTCGTCGTCGTCGTCTCGTCATTGGACGTGATGGAGGAGTGCTTCACTAAGAACGACATCGTTTTAGCCAACCGTCCTCGGTTGCTAGTCGGCAAATACATCGGCTACAACCACACTACGATGGTAGCGTCACCGTACGGCGAACACTGGCGGAACCTCCGCCGAATTGGAGCCATCGAGATCTTTTCGGCATCTCGCCTCAATAAATTAGCTGGAATCCGAAAGGACGAAGTGGAACGGTTACTGAGGAAGCTATCGAGGAATTCGTTGTATGGATTCTCGAAGGTACATATGCAATCGGCGATTTCGGAACTGACGTTTAACATATCGATGAGAATGGCGGCCGGAAAGAGGTATTTCGGTGAGGAAGTGACGGATGAAGAGGAAGCGAGACAGTTCAGAGATTTGATTAAACAGGTGGTGGCGTTGGGAGGAGTTTCGAATCCAGGAGATTTCATTCCGATGATAAATTGGATTCCGAACGGGTTCAAGAGGAAGGTTTCGGGACTTGCAAAGAGGACGGACGCGCTTTTGCAGGGATTGATCGAGGAACATCGGAGCAAGAAGGAAGAAGGAAGGAACACGATGATCGATCATTTGCTCTCTCTGCAAGAATCAGAGCCGGAGAACTATGGAGATCAAATTATCAAAGGAATTATTCTGGTTTTGTTACTAGCAGGAACGGACACATCAGCTGTGACAATTGAATGGGCTCTAGCTCACTTACTCAATAATCCAGAGGTACTAAAAAAGGCTAGAGAAGAGCTAGACGCTCAAATCGGAGAAGATCGACTAGTGGAAGAATCAGACGTCTCCAAGTTACCATATCTTCAAGGAATCATCTCCGAGACTCTTCGGCTGAACCCAGCTGCTCCGATGCTAGTGCCACATCTCACCTCCGACGATTGCACAATCAGCAGCTATGACATACCACGTGACACAATTGTATTGGTTAATGCATGGGCCATCCACAGAGATCCTAATCTATGGGAAGAACCCACACTATTCAAACCAGAAAGACACCAAAAGTCAACAGAACTAGGTGAACATCAGGTCCACAAGTTGGTTCCATTTGGAGTTGGACGACGAGCTTGCCCTGGGTCTGGCATGGCTCAACGAGTGGTGGGGTTGGCTCTGGCGGCGCTAATTCAGTGCTACGAATGGCAGAGGATTGGCGAAGAGAACATAGACATGACGGAGGGACGAGGTGTCACTATGCCCAAGGCAGTGCCATTGGAAGCCATGTGCAAACCTCGTCGTATCATCCACAACCTTTTTAACTGA | 1494 | 48.59 | MENYSLLCLFLSLISLLFAFNLRRRRNLPPSPLSLPIIGHLHYLKIPVHRTFQNLSAKYGPVISLWFGSRLVVVVSSLDVMEECFTKNDIVLANRPRLLVGKYIGYNHTTMVASPYGEHWRNLRRIGAIEIFSASRLNKLAGIRKDEVERLLRKLSRNSLYGFSKVHMQSAISELTFNISMRMAAGKRYFGEEVTDEEEARQFRDLIKQVVALGGVSNPGDFIPMINWIPNGFKRKVSGLAKRTDALLQGLIEEHRSKKEEGRNTMIDHLLSLQESEPENYGDQIIKGIILVLLLAGTDTSAVTIEWALAHLLNNPEVLKKAREELDAQIGEDRLVEESDVSKLPYLQGIISETLRLNPAAPMLVPHLTSDDCTISSYDIPRDTIVLVNAWAIHRDPNLWEEPTLFKPERHQKSTELGEHQVHKLVPFGVGRRACPGSGMAQRVVGLALAALIQCYEWQRIGEENIDMTEGRGVTMPKAVPLEAMCKPRRIIHNLFN | 497 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 32214180 | 32217527 | - | CrPI670011_04g013380.1 | Cre04g1338 | 495642 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre04g1338 | 497 | PRINTS | P450 superfamily signature | 426 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | P450 superfamily signature | 435 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | Pfam | Cytochrome P450 | 29 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | SUPERFAMILY | Cytochrome P450 | 29 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 489 | IPR050651 | - | |
| Cre04g1338 | 497 | CDD | CYP81 | 60 | 482 | - | - | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 425 | 435 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 435 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 56 | 75 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 175 | 193 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 80 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 348 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | FunFam | Cytochrome P450 family protein | 20 | 492 | - | - | |
| Cre04g1338 | 497 | Gene3D | Cytochrome P450 | 19 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre04g1338 | 497 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 428 | 437 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre02g1160 | Cre-Chr2:10732512 | Cre04g1338 | Cre-Chr4:32214180 | 2.10E-165 | dispersed | |
| Cre02g1162 | Cre-Chr2:10755380 | Cre04g1338 | Cre-Chr4:32214180 | 1.60E-160 | dispersed | |
| Cre04g1338 | Cre-Chr4:32214180 | Cre06g0924 | Cre-Chr6:2653632 | 9.70E-163 | dispersed | |
| Cre11g1350 | Cre-Chr11:14678281 | Cre04g1338 | Cre-Chr4:32214180 | 2.00E-13 | dispersed | |
| Cre04g1338 | Cre-Chr4:32214180 | Cre04g1340 | Cre-Chr4:32227527 | 1.90E-211 | proximal | |
| Cre04g1338 | Cre-Chr4:32214180 | Cre05g2221 | Cre-Chr5:33876875 | 3.00E-140 | wgd | |
| Cre04g1338 | Cre-Chr4:32214180 | Cre08g1574 | Cre-Chr8:28319998 | 7.00E-129 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre04g1338 | K13260 | - | csv:101211829 | 818.92 |