Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1338 ATGGAAAATTACTCTTTGCTTTGCCTTTTTCTCTCTCTTATCTCTCTCCTCTTCGCTTTCAATCTCCGCCGTCGCAGAAACTTACCGCCCAGTCCGCTGTCACTTCCCATCATCGGCCACCTCCATTACCTCAAAATCCCCGTCCACCGAACTTTCCAGAACCTCTCTGCAAAATACGGACCAGTAATCTCTCTTTGGTTCGGATCTCGCCTCGTCGTCGTCGTCTCGTCATTGGACGTGATGGAGGAGTGCTTCACTAAGAACGACATCGTTTTAGCCAACCGTCCTCGGTTGCTAGTCGGCAAATACATCGGCTACAACCACACTACGATGGTAGCGTCACCGTACGGCGAACACTGGCGGAACCTCCGCCGAATTGGAGCCATCGAGATCTTTTCGGCATCTCGCCTCAATAAATTAGCTGGAATCCGAAAGGACGAAGTGGAACGGTTACTGAGGAAGCTATCGAGGAATTCGTTGTATGGATTCTCGAAGGTACATATGCAATCGGCGATTTCGGAACTGACGTTTAACATATCGATGAGAATGGCGGCCGGAAAGAGGTATTTCGGTGAGGAAGTGACGGATGAAGAGGAAGCGAGACAGTTCAGAGATTTGATTAAACAGGTGGTGGCGTTGGGAGGAGTTTCGAATCCAGGAGATTTCATTCCGATGATAAATTGGATTCCGAACGGGTTCAAGAGGAAGGTTTCGGGACTTGCAAAGAGGACGGACGCGCTTTTGCAGGGATTGATCGAGGAACATCGGAGCAAGAAGGAAGAAGGAAGGAACACGATGATCGATCATTTGCTCTCTCTGCAAGAATCAGAGCCGGAGAACTATGGAGATCAAATTATCAAAGGAATTATTCTGGTTTTGTTACTAGCAGGAACGGACACATCAGCTGTGACAATTGAATGGGCTCTAGCTCACTTACTCAATAATCCAGAGGTACTAAAAAAGGCTAGAGAAGAGCTAGACGCTCAAATCGGAGAAGATCGACTAGTGGAAGAATCAGACGTCTCCAAGTTACCATATCTTCAAGGAATCATCTCCGAGACTCTTCGGCTGAACCCAGCTGCTCCGATGCTAGTGCCACATCTCACCTCCGACGATTGCACAATCAGCAGCTATGACATACCACGTGACACAATTGTATTGGTTAATGCATGGGCCATCCACAGAGATCCTAATCTATGGGAAGAACCCACACTATTCAAACCAGAAAGACACCAAAAGTCAACAGAACTAGGTGAACATCAGGTCCACAAGTTGGTTCCATTTGGAGTTGGACGACGAGCTTGCCCTGGGTCTGGCATGGCTCAACGAGTGGTGGGGTTGGCTCTGGCGGCGCTAATTCAGTGCTACGAATGGCAGAGGATTGGCGAAGAGAACATAGACATGACGGAGGGACGAGGTGTCACTATGCCCAAGGCAGTGCCATTGGAAGCCATGTGCAAACCTCGTCGTATCATCCACAACCTTTTTAACTGA 1494 48.59 MENYSLLCLFLSLISLLFAFNLRRRRNLPPSPLSLPIIGHLHYLKIPVHRTFQNLSAKYGPVISLWFGSRLVVVVSSLDVMEECFTKNDIVLANRPRLLVGKYIGYNHTTMVASPYGEHWRNLRRIGAIEIFSASRLNKLAGIRKDEVERLLRKLSRNSLYGFSKVHMQSAISELTFNISMRMAAGKRYFGEEVTDEEEARQFRDLIKQVVALGGVSNPGDFIPMINWIPNGFKRKVSGLAKRTDALLQGLIEEHRSKKEEGRNTMIDHLLSLQESEPENYGDQIIKGIILVLLLAGTDTSAVTIEWALAHLLNNPEVLKKAREELDAQIGEDRLVEESDVSKLPYLQGIISETLRLNPAAPMLVPHLTSDDCTISSYDIPRDTIVLVNAWAIHRDPNLWEEPTLFKPERHQKSTELGEHQVHKLVPFGVGRRACPGSGMAQRVVGLALAALIQCYEWQRIGEENIDMTEGRGVTMPKAVPLEAMCKPRRIIHNLFN 497
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 32214180 32217527 - CrPI670011_04g013380.1 Cre04g1338 495642
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1338 497 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 Pfam Cytochrome P450 29 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 SUPERFAMILY Cytochrome P450 29 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PANTHER CYTOCHROME P450 82C3-RELATED 14 489 IPR050651 -
Cre04g1338 497 CDD CYP81 60 482 - -
Cre04g1338 497 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 FunFam Cytochrome P450 family protein 20 492 - -
Cre04g1338 497 Gene3D Cytochrome P450 19 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1338 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1160 Cre-Chr2:10732512 Cre04g1338 Cre-Chr4:32214180 2.10E-165 dispersed
Cre02g1162 Cre-Chr2:10755380 Cre04g1338 Cre-Chr4:32214180 1.60E-160 dispersed
Cre04g1338 Cre-Chr4:32214180 Cre06g0924 Cre-Chr6:2653632 9.70E-163 dispersed
Cre11g1350 Cre-Chr11:14678281 Cre04g1338 Cre-Chr4:32214180 2.00E-13 dispersed
Cre04g1338 Cre-Chr4:32214180 Cre04g1340 Cre-Chr4:32227527 1.90E-211 proximal
Cre04g1338 Cre-Chr4:32214180 Cre05g2221 Cre-Chr5:33876875 3.00E-140 wgd
Cre04g1338 Cre-Chr4:32214180 Cre08g1574 Cre-Chr8:28319998 7.00E-129 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1338 K13260 - csv:101211829 818.92