Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1340 ATGGATTTAGACACTTACTTCCTTTACTCTTCCCTCTCTCTTTTCTTTCTTCTTCTTGCTTTCAATCTCATTCGTCGATCACTTCAAGTTCGCAATAACTTACCGCCGAGTCCGCCTTCTCTTCCGATCATCGGTCATCTCCATCTCTTGAAAAAGCCACTACACCGAAATTTCCAGAACCTCTCTGCCAAATATGGACCTGTTATGTCTCTCCGCCTCGGATCTAAGCTCGCAGTCGTTATATCCTCGTCGGCGGCGGTGGAGGAGTGCTTCACTAAAAACGACGTTGTTCTCGCCAACCGTCCGCGTTTGCTCATTGGAAAATACATCGGCTATAACTACACTACCATGATTGCGGCTCCGTACGGCGACCACTGGCGGAACCTTCGTCGAATAGGCGCCATTGAAATCTTCTCTTTATCTCGAATCAACGAATTCGCCGATATCCGGAGGGATGAAGTGAATCGATTGGTGCGAAAACTATCGCATAATTCGATTCATCAGTTCTCGAAAGTAGAAATTCAAACGGCGATGTCGGAGCTGACGTTCAACATCTCAATGAGAATGGCGGCCGGGAAGAGGTATTACGGCGAGGACGTGACGAACGAAGAAGAGGCGAGGAGATTCAGGGAGTTAATTAAAGAGATTGTGGCGATAGCAGGAGTATCAAATCCAGGGGATTTCTTACCCATATTGAACTGGATCTCGAATGGTTTTGAAAGGAAATTAATTCAACTGGGGAAGAAAGTGGATGCGTTCTTGCAGGGGCTAATTGATGAACACCGAAGGAAGAAGGAAGAAGGAAGGAACACGATGATCGATCACTTGCTTTCGCTACAAGAATCGGAACCCGATCACTATAACGATCAAATAATCAAGGGATTTATAATGGTATTACTGACTGCGGGGTCCGACACATCAGCTGTGACAATGGAATGGGCCTTGTCTCATCTACTAAACAATCCCCAAGTGTTAAGGAAGGCAAAAGACGAAGTAGACACTCAAATTGGAGGAGAACGACTCATGGAAGAACCAGACATTTCCAAACTACCTTATCTTCAAAAAATCATCTCTGAGACTCTTCGGCTGAATCCTGCGGCACCCATGTTGGTTCCCCATTATGCAGCCAATGACTGCACAATATGTGGATACGATGTGCCACGCGGTACGATGGTACTAGTCAATGCCTGGGCCATACATAGGGATTCAAATGAATGGGAGGATCCCATAAGTTTCAAACCAGAGCGATACCAAAAGTCAGAAGCCGTGGAGGTACACAAGTTGTTGCCTTTTGGAGTAGGGAGACGAGCTTGTCCTGGGTCTGCCATGGCGCACAGAGTGATGGGTCTAACTTTGGCAACTCTGATTCAATGCTTTGAGTGGGAGAAGATTGGAGAAGAAGACATCGATATGAGTGAGCGGAGTGGTGCCACAATGACCAAGATGGTGCCATTGGAGGCCATGTGCAAAGCTCGTCCCATCATCAACAACCTTCTTCACTAA 1503 46.64 MDLDTYFLYSSLSLFFLLLAFNLIRRSLQVRNNLPPSPPSLPIIGHLHLLKKPLHRNFQNLSAKYGPVMSLRLGSKLAVVISSSAAVEECFTKNDVVLANRPRLLIGKYIGYNYTTMIAAPYGDHWRNLRRIGAIEIFSLSRINEFADIRRDEVNRLVRKLSHNSIHQFSKVEIQTAMSELTFNISMRMAAGKRYYGEDVTNEEEARRFRELIKEIVAIAGVSNPGDFLPILNWISNGFERKLIQLGKKVDAFLQGLIDEHRRKKEEGRNTMIDHLLSLQESEPDHYNDQIIKGFIMVLLTAGSDTSAVTMEWALSHLLNNPQVLRKAKDEVDTQIGGERLMEEPDISKLPYLQKIISETLRLNPAAPMLVPHYAANDCTICGYDVPRGTMVLVNAWAIHRDSNEWEDPISFKPERYQKSEAVEVHKLLPFGVGRRACPGSAMAHRVMGLTLATLIQCFEWEKIGEEDIDMSERSGATMTKMVPLEAMCKARPIINNLLH 500
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 32227527 32230252 - CrPI670011_04g013400.1 Cre04g1340 495644
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1340 500 SUPERFAMILY Cytochrome P450 35 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 CDD CYP81 66 485 - -
Cre04g1340 500 FunFam Cytochrome P450 family protein 26 495 - -
Cre04g1340 500 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 Pfam Cytochrome P450 35 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 Gene3D Cytochrome P450 20 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PANTHER CYTOCHROME P450 82C3-RELATED 16 492 IPR050651 -
Cre04g1340 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre04g1340 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre04g1340 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1149 Cre-Chr2:10551774 Cre04g1340 Cre-Chr4:32227527 4.70E-157 dispersed
Cre02g1150 Cre-Chr2:10569043 Cre04g1340 Cre-Chr4:32227527 2.10E-165 dispersed
Cre04g1340 Cre-Chr4:32227527 Cre06g0924 Cre-Chr6:2653632 1.70E-159 dispersed
Cre04g1338 Cre-Chr4:32214180 Cre04g1340 Cre-Chr4:32227527 1.90E-211 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1340 K13260 - csv:101215449 878.241