Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1364 ATGGGTCGCTTCAATCTCCTTATTGTACTCTCTCTTCTTTCTCCCTTCTTCTTTCCTTCCCCAACACTCGCCCAACTCCGACAAAACTTCTACGCCAATATTTGCCCCAATGTCGAAAACATTGTCCGCTCCGAAGTTACCAAAAAATTTCAACAAACTTTCGTCACTGTTCCCGCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCTGTAATTATTGCTTCCACCGCATCCAACAAGGCCGAGAAGGACCATCCCGATAACCTCTCACTCGCCGGAGATGGATTCGACACCGTCATCAAAGCTAAAGCCGCCCTCGACGCCGTCCCTCAATGCCGAAACAGAGTCTCCTGTGCCGATATTCTCGCTTTAGCCACTCGTGATGTCATCGCATTGTCCGGCGGACCATCGTATGCGGTGGAGCTGGGAAGATTAGACGGCCTGGTTTCTAGAGCCTCCGACGTGGACGGGAGACTTCCAGCACCGACGTTTAATCTCAATCAGCTCAATTCTCTGTTTGCTGCGAATGGGCTTACACAACAAGACATGATCGCACTCTCAGCGGCTCACACCGTGGGATTCTCCCACTGTGGAAAATTCTCAAATCGAATTTACAGGTTTGCCCCTGGGAAACCAGTGGACCCTACACTAAACAAAACGTATGCAACCCAGCTACAAGCGATGTGCCCGAAGAATGTGGACCCGAGAGTGGCGATTAACATGGACCCAATCACGCCCAGAGCGTTTGACAACATTTACTTTAGAAATCTACAGCAAGGGATGGGGTTGTTCACGTCGGACCAGGTTCTATTTACGGACGCCCGGTCCAGGCCCACAGTGAACGCGTGGGCTACCAATTCCCAAGCCTTTAATAAAGCGTTTATTGAAGCTATGACTAAGTTGGGGCGGGTCGGGGTGAAGACCGGTAGAAACGGTAATATTCGGCGCGATTGTGGAGCTTTCAATTGA 987 50.56 MGRFNLLIVLSLLSPFFFPSPTLAQLRQNFYANICPNVENIVRSEVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAALDAVPQCRNRVSCADILALATRDVIALSGGPSYAVELGRLDGLVSRASDVDGRLPAPTFNLNQLNSLFAANGLTQQDMIALSAAHTVGFSHCGKFSNRIYRFAPGKPVDPTLNKTYATQLQAMCPKNVDPRVAINMDPITPRAFDNIYFRNLQQGMGLFTSDQVLFTDARSRPTVNAWATNSQAFNKAFIEAMTKLGRVGVKTGRNGNIRRDCGAFN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32468319 32469623 + CrPI670011_04g013640.1 Cre04g1364 495668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1364 328 PANTHER - 13 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 FunFam Peroxidase 166 307 - -
Cre04g1364 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 Pfam Peroxidase 42 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 Gene3D - 29 328 - -
Cre04g1364 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 FunFam Peroxidase 29 174 - -
Cre04g1364 328 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre04g1364 328 Gene3D Peroxidase, domain 2 166 307 - -
Cre04g1364 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cre04g1364 328 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre04g1364 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1290 Cre-Chr1:26128940 Cre04g1364 Cre-Chr4:32468319 3.20E-77 dispersed
Cre04g1364 Cre-Chr4:32468319 Cre11g1193 Cre-Chr11:9770968 1.90E-114 dispersed
Cre02g1532 Cre-Chr2:27657129 Cre04g1364 Cre-Chr4:32468319 7.50E-143 transposed
Cre05g1921 Cre-Chr5:31381953 Cre04g1364 Cre-Chr4:32468319 1.90E-114 transposed
Cre04g1364 Cre-Chr4:32468319 Cre06g2540 Cre-Chr6:33040600 1.10E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1364 K00430 - csv:101206860 611.683