Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre04g1444 ATGGGGAAATCACCGGCGGAAGAGCATCCTAAGAAGGCTTTTGGATGGGCTGCCTCAGATACCTCCGGCCTTCTTTCTCCATTTCATTTCTCCAGAAGAGAAACAGGGGAAAATGATGTAGCTTTTAAAGTTCTTTACTGTGGAATTTGCCATTCTGACCTTCACATGGTGAAGAATGAGTGGGGAACTACCATTTACCCTATCGTTCCTGGTCATGAAATCGTGGGCGAGGTAACAGAGGTTGGAAGCAAAGTAAAGAACTTCAAGGTCGGAGACAAAGTTGGCGTAGGATGTATGGTTCAATCCTGCCGCTCCTGTGATAACTGTTCTAACGACCTCGAGAACTATTGCCCCAAAATGATCCTCACCTACTCCGCCAAGAACACTGACGGGACCATAACCTACGGAGGCTACTCCAACTGTATGGTTGCTGACGAGCATTTCATTGTTCGCATTCCCGATGGCATCCCTCTACACGCTGGGGCTCCCCTGCTGTGCGCTGGTATCACAGTTTACAGCCCCTTGAGATACTTTGGACTTGACAAGCCTGGAATGCACATCGGTGTGGTTGGCCTCGGTGGGCTTGGTCACGTTGCTGTCAAATTTGCTAAGGCCTTCGGCGCTAAGGTTACTGTGATTAGTACCTCGCCTAATAAGAAGCAGGAGGCTATTGAACATCTTGGGGCTGATTCATTCTTGGTCAGCCGTGATCAAGAGCAATTGCAGGCTGCTAGGGGGACTTTGGATGGTATCATAGACACAGTCTCTGCTGCACATCCCCTTCTTCCTCTGCTGTCGCTTGTAAAAACACATGGAAAATTTGTTATGGTTGGAGCACCAGAGAAGCCACTTGAGCTCCCGGCCTTTGCTCTTATTGGGGGTAGGAAAACAATGGCCGGTAGTTGCATTGGAGGGATGAAGGAAACACAAGAGATGATTGATTTTGCTGCCAAACACAACATTACGGCAGATGTCGAGGTGATTCCAATGGCAGACGTCAACAAGGCAATGGAACGAATGCTGAAACAGGATGTCAAGTATCGGTTCGTCATAGACATTGCCAACTCATTGAAGCCGTAG 1080 48.52 MGKSPAEEHPKKAFGWAASDTSGLLSPFHFSRRETGENDVAFKVLYCGICHSDLHMVKNEWGTTIYPIVPGHEIVGEVTEVGSKVKNFKVGDKVGVGCMVQSCRSCDNCSNDLENYCPKMILTYSAKNTDGTITYGGYSNCMVADEHFIVRIPDGIPLHAGAPLLCAGITVYSPLRYFGLDKPGMHIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKQEAIEHLGADSFLVSRDQEQLQAARGTLDGIIDTVSAAHPLLPLLSLVKTHGKFVMVGAPEKPLELPAFALIGGRKTMAGSCIGGMKETQEMIDFAAKHNITADVEVIPMADVNKAMERMLKQDVKYRFVIDIANSLKP 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33261193 33263665 - CrPI670011_04g014440.1 Cre04g1444 495748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre04g1444 359 FunFam Uncharacterized protein 16 166 - -
Cre04g1444 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cre04g1444 359 SUPERFAMILY GroES-like 22 184 IPR011032 -
Cre04g1444 359 Gene3D - 167 323 - -
Cre04g1444 359 Pfam Alcohol dehydrogenase GroES-like domain 36 154 IPR013154 -
Cre04g1444 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 321 IPR036291 -
Cre04g1444 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Cre04g1444 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cre04g1444 359 Gene3D - 16 353 - -
Cre04g1444 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Cre04g1444 359 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Cre04g1444 359 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0418 Cre-Chr2:1365386 Cre04g1444 Cre-Chr4:33261193 2.10E-143 dispersed
Cre02g0419 Cre-Chr2:1377954 Cre04g1444 Cre-Chr4:33261193 8.30E-148 dispersed
Cre02g0991 Cre-Chr2:7370929 Cre04g1444 Cre-Chr4:33261193 6.20E-103 dispersed
Cre04g1444 Cre-Chr4:33261193 Cre05g1713 Cre-Chr5:28837171 1.00E-121 dispersed
Cre04g1444 Cre-Chr4:33261193 Cre05g1206 Cre-Chr5:11711350 6.50E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre04g1444 K23232 - csv:101222715 684.871